Janthinobacterium sp. B9-8: VN23_19020
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Entry
VN23_19020 CDS
T04271
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab00250
Alanine, aspartate and glutamate metabolism
jab00310
Lysine degradation
jab00350
Tyrosine metabolism
jab00650
Butanoate metabolism
jab00760
Nicotinate and nicotinamide metabolism
jab01100
Metabolic pathways
jab01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VN23_19020 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VN23_19020 (gabD)
00310 Lysine degradation
VN23_19020 (gabD)
00350 Tyrosine metabolism
VN23_19020 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
VN23_19020 (gabD)
Enzymes [BR:
jab01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
VN23_19020 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
VN23_19020 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
VN23_19020 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AMC36528
UniProt:
A0A0X8GST1
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Position
complement(4207521..4208975)
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AA seq
484 aa
AA seq
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MLQLKNPALFKQACYINGQWQEAAEKIAVNNPATGEVIGHIPKMGRSETAQAIAAAKLAM
PAWQKKTAQERSVILRRWFELMLENQEDLAQILSAEQGKPLAEARGEVVYGARFIEWFAE
EAKRIYGDVIAAPQADKRLVVIKQAIGVVAAITPWNFPNAMITRKAGPALAAGCAIVLKP
ATQTPFSALALAVLATEAGIPNGVFNVITGSASEIGGELTRSPDVAKLSFTGSTDIGKLL
MRQCADTIKKVSLELGGNAPFVVFDDADLDAAVEGAMVSKFRNAGQTCICANRIYVQDSV
YDAFAAKFALAVAKLKVGVGTEEGVTQGPLIDDKAVQKVEEHIKDALEQGATLAHGGKRH
ALGHSFFEPTVLLNVTAKMKVAREETFGPLAPLFRFSSEEELIQLANDTEFGLASYFYSR
DVGRIWRVAEALEYGMVGINTGTISSELAPFGGVKQSGLGREGSKYGIDDYISIKCLCMG
GIDR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgttacaactcaaaaaccctgccctctttaagcaagcctgctatatcaacggccaatgg
caagaagctgcggaaaaaatcgcggtgaacaaccctgctactggggaggtcatcgggcat
attcctaaaatgggccgcagcgaaacagctcaagccattgccgcagccaagctcgccatg
cccgcttggcaaaagaaaaccgctcaggagcgcagtgttattttgcgccgctggtttgag
ttgatgctggagaatcaagaagacctcgcgcaaattttaagcgccgaacaaggcaagcca
ctggccgaggctcgcggtgaagtggtctatggggcacgctttattgaatggtttgcagaa
gaagccaagcgtatttacggcgatgtgattgctgctccgcaggccgacaaacgtctggtg
gtgatcaagcaagccattggcgtggtcgcagccattacgccgtggaatttccccaacgcc
atgatcacccgtaaagcggggccagctctcgccgcaggctgcgccattgtgctgaaacct
gccacccaaacgcctttttctgcactggctttggcagtattagccactgaggcaggcatt
cccaacggtgtatttaatgtgattactggctccgccagcgaaattggtggcgagctaacg
cgtagccccgatgtggccaagctgagctttaccggctctaccgacatcggcaaattgctg
atgcggcaatgcgccgatacgattaaaaaagtatcgctagagctgggcggtaatgcgccg
tttgtggtgtttgatgatgccgatctagatgccgctgttgaaggtgccatggtctctaaa
tttcgcaacgccgggcaaacctgcatctgcgccaaccgcatctatgtgcaagacagcgtt
tacgacgcctttgccgccaaattcgccctcgccgttgccaagctcaaagtgggtgttggc
acagaggaaggcgtgacccaaggcccgctgatcgatgacaaagcggtgcaaaaggtcgaa
gaacatatcaaggacgcactggagcaaggcgcaacactggctcacggcggcaagcgccat
gcgctggggcatagcttctttgagccaaccgtcttgcttaatgtcaccgccaaaatgaaa
gtcgctcgtgaagaaacctttggcccgctcgcgccactctttcgatttagcagcgaagaa
gagctcatccaactggccaacgataccgaattcggccttgccagctacttctacagccgc
gatgtcggccgcatctggcgtgtggccgaagcattggaatacggcatggttggtatcaac
accggcacgatctctagcgagctcgccccttttggcggagtaaaacaatcgggcctgggc
cgggaaggatccaaatacggtatcgatgattatatttcgatcaaatgcctgtgcatggga
gggattgatcgctaa
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