Janthinobacterium sp. B9-8: VN23_19565
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Entry
VN23_19565 CDS
T04271
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VN23_19565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jab03019
]
VN23_19565
Messenger RNA biogenesis [BR:
jab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VN23_19565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AMC36632
UniProt:
A0A109RW51
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All DBs
Position
4345007..4345522
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AA seq
171 aa
AA seq
DB search
MLDRDGYRPNVGIIIINRQNQVFWGKRVREHSWQFPQGGIKQGETPEQAMYRELMEEVGL
GPQHVEIIGRTRDWLKYDVPTNWVRREWRGTYRGQKQIWFLLRLTGHDSDVCLRRTTHPE
FDAWRWTEYWSPLDSVIEFKRTVYESALFELTRFFEEAPERVVRAMRFSGH
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcgtgatggctatcggcctaacgtcggcatcatcatcatcaaccggcaaaac
caggtgttctggggtaaacgagtgcgagagcattcgtggcagtttccgcaaggcggcatt
aaacagggtgaaacacccgaacaggcgatgtatcgcgagctgatggaagaagtcggatta
ggccctcagcatgttgaaatcattggccgcacaagggactggttgaagtacgatgtgccg
acaaactgggttcgccgcgaatggcgcggtacgtaccgagggcagaagcaaatttggttt
ttgcttcgcctgacagggcacgattctgatgtgtgcttgcgccgcactacgcatcctgaa
tttgatgcgtggcgttggactgaatattggtcaccactggattcggtgattgagttcaag
cgtacggtgtatgaatctgccctttttgaactgacgcgtttctttgaagaagcacctgag
cgtgtggttcgtgccatgcgtttttcaggccactag
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