Janthinobacterium sp. B9-8: VN23_20185
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Entry
VN23_20185 CDS
T04271
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab00730
Thiamine metabolism
jab01100
Metabolic pathways
jab01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VN23_20185
Enzymes [BR:
jab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VN23_20185
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AMC36740
UniProt:
A0A0X8GQ69
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All DBs
Position
complement(4491632..4493557)
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AA seq
641 aa
AA seq
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MNAKAQFLASTAVVDDAAIQPLPNSRKIYVQGSRSDIRVPMREISQADTPLQMSISGATE
KNPPIFVYDCSGPYSDPDAKIDVRKGLQAIRSTWISERNDTELLSQLTSDYGRMREADAK
LDELRFELKRQPRKAKLGANVSQMHYARKGIITPEMEYVAIRENMNRAAYLQSLRDSSPT
GEKMLAMMNRQHKGENYGAVMPDEITPEFVRSEIACGRAIIPNNINHPESEPMIIGRNFL
VKINGNIGNSAVSSSISEEVEKMTWGIRWGADTIMDLSTGKNIHETREWILRNSPVPIGT
VPIYQALEKVNGKAEDLTWEIFKDTLIEQAEQGVDYFTIHAGVLLRYVPMTAGRMTGIVS
RGGSIMAKWCLAHHKENFLYTHFADICEIMKAYDVAFSLGDGLRPGSIWDANDEAQLGEL
KTLGELTQIAWQHDVQVMIEGPGHVPMQLIKENMDKELEWCHEAPFYTLGPLTTDIAPGY
DHITSAIGAAQIGWYGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGA
QIRDNALSKARFEFRWEDQFNLGLDPDRARSYHDETMPKDSGKVAHFCSMCGPHFCSMKI
TQDVREFAAKQGIAEADANQVGMQTMSIEFIKKGAEVYHKA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaaaagcccaatttttagcatccactgccgtcgttgacgacgcagccatccag
ccactccccaattcgcgcaagatttacgttcaaggctcacgtagcgacatccgtgtgccg
atgcgagaaatcagtcaggccgataccccgctccaaatgagtatcagcggcgcaacagaa
aaaaacccgcctatctttgtttacgactgctccggcccttattccgatccagatgcaaaa
attgatgtacgcaaaggcctgcaagccattcgtagcacatggattagcgagcgcaatgac
accgaactgctgagccagctcacgagcgattatggccgtatgcgcgaggcggatgccaag
ctggatgaattacgctttgagctaaaacgtcagccacgcaaagccaagctgggtgccaac
gtcagccagatgcactacgcccgtaaaggcatcatcaccccagaaatggaatacgtagcg
attcgtgagaacatgaatcgtgcggcttatttacaaagcctgcgggacagcagccctacc
ggtgaaaaaatgctggcgatgatgaatcgccaacataagggcgaaaactacggcgcagtg
atgccggatgagatcaccccggaatttgtgcgcagcgaaatcgcctgtggccgcgccatt
attcccaataatattaaccacccagaatccgagccaatgattattggccgtaattttctg
gttaagattaacggcaatatcggtaactccgccgtcagctccagcattagtgaagaagta
gaaaaaatgacttggggcattcgctggggtgcggacaccatcatggatttgtccaccggc
aagaatatccatgaaacccgcgagtggattttacgcaacagtcctgtacccatcggcacc
gtccctatctaccaagcgctcgaaaaagtaaacggcaaggctgaagatctaacttgggag
atcttcaaagacacgctgatcgagcaagccgagcaaggcgttgattacttcaccatccat
gctggcgtattgctccgctatgtgccgatgaccgctggccgcatgaccggcattgtgagc
cgtggtggctcgattatggccaaatggtgtttggcgcatcataaagaaaacttcctttac
acccactttgccgacatctgcgaaatcatgaaagcctacgatgtggccttcagcttgggc
gatggcctgcgccctggctcgatctgggatgccaatgatgaagcacaactgggcgagcta
aaaacactcggcgagctaacgcaaatcgcctggcagcacgatgtgcaagtgatgatcgaa
ggccctggccatgtacctatgcaattgattaaagaaaatatggataaggaactggaatgg
tgtcatgaagcgccgttctacacactcgggccgctgactaccgatatcgcccccggctac
gaccatatcacctcggccattggtgcagcgcaaattggttggtacggcaccgccatgctt
tgctatgtcacgccaaaagagcatttaggcctgcccaataaagacgatgtaaaagaaggc
atcattacttataagctggcagcacacgctgcggatcttgccaagggtcaccccggcgca
cagattcgtgacaacgcgctatccaaagcacgctttgaattccgctgggaagaccagttt
aatctgggcctcgatccggatcgcgcccgctcttaccacgacgaaaccatgccaaaagac
agtggcaaagtggcgcacttttgctcgatgtgtggcccgcatttctgctcgatgaaaatt
acccaagatgtgcgtgagtttgcggccaaacaggggattgcagaagcggatgccaatcag
gtcggtatgcaaacgatgtcgattgaatttattaagaaaggtgccgaggtttatcacaag
gcctag
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