Janthinobacterium sp. B9-8: VN23_20435 Help Entry VN23_20435        CDS       T04271                                  Name (GenBank) RNA polymerase subunit sigma   KO K03086   RNA polymerase primary sigma factor Organism jab  Janthinobacterium sp. B9-8 Pathway jab02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:jab00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     VN23_20435  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:jab03021]     VN23_20435 Transcription machinery [BR:jab03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      VN23_20435 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_ner Sigma70_r1_1 Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 SPO22 Motif Other DBs NCBI-ProteinID:  AMC37184 LinkDB All DBs Position 4556162..4558096 Genome browser AA seq 644 aa AA seqDB search MDNEDQARTDFREVNRPSAEQKADPEQRKAKFKTLIVLGKERGYLTYAEINDHLPDDMLD AEQIEGIISMISNMGIQVYDEAPDAEDLLMSDAAPSVPDEDAAEEAEAALSSVDAEFGRT TDPVRMYMREMGTVELLTREGEIEIAKRIEDGLKHMIQAISACPTTVAYILGLVEKGLAD EIRIDDVIDGFIDPNADENTPPPIEVIEAEAEDADDAVDEEEGEEDDGSAAAKANLELLK TQVREHFDIVREHFDKMIKALAKEGAHGKNYLEHQQAIAGIFLITRFSARQVESLCDQLR GMVDEIRSCEREIMDICTVRVKMPRDHFIKTFPGRETDTTWVVDEINYGHKYSAILARYQ HAIMEKQQTLAQLQVNAMIQIKDLKEINRQMSTGEAKARRAKREMIEANLRLVISIAKKY TNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPV HMIETINKMNRIQRQILQETGIEPTPDELAEKMEMPEDKIRKILKIAKEPISMETPIGDD DDSHLGDFIEDSNNLAPAEAAIYAGLREATKEVLDTLTPREAKVLRMRFGIDMNTDHTLE EVGKQFDVTRERIRQIEAKALRKLRHPTRSERLKSFVESQASEG NT seq 1935 nt NT seq  +upstreamnt  +downstreamnt atcgacaacgaagaccaagcgcggactgatttccgtgaggtcaatcggccatctgctgag cagaaggccgatcccgaacaacgtaaagcgaagtttaaaacgctgatcgtgctcggtaaa gagcgcggctatctaacctacgccgagatcaacgaccacctgccagatgacatgctggat gccgagcaaatcgaaggcatcatcagcatgatcagcaatatgggcatccaggtgtacgac gaagcaccggacgcagaagatctgcttatgtccgatgctgcgccgtctgtaccggatgaa gatgctgctgaagaagccgaagcagccttatcttccgtcgatgcagagtttggtcgcact actgacccagtgcgcatgtatatgcgtgagatgggtacggtagagctcttaacccgtgaa ggcgaaattgaaatcgccaaacggattgaggacggtcttaagcacatgatccaggcgatc tctgcctgcccaactactgttgcctatattttaggcttggtagaaaaaggcttggctgat gagattcgcattgatgatgtgatcgacggctttatcgaccctaacgcagatgaaaacacc ccaccgccaatcgaagtgattgaagcggaagccgaggatgctgacgatgcggtcgatgaa gaagaaggcgaagaagacgacggtagtgcagcagctaaggccaatcttgagttattaaaa actcaggtgcgtgagcatttcgacattgtgcgtgagcactttgacaaaatgattaaagcg ctggccaaagaaggcgcacacggcaaaaactatctggagcaccagcaagccattgccggg attttcctgattactcgcttctcggctcgccaggttgaatcgctctgcgaccaactacgt ggcatggtggatgaaatccgcagctgcgagcgtgaaatcatggatatctgtactgtccgg gtaaaaatgccgcgtgatcacttcatcaaaaccttcccaggccgtgaaacagatacgaca tgggtagtggatgagatcaactacggtcacaaatactccgccattcttgcgcgctatcag cacgccattatggaaaagcaacaaactctggctcagctgcaagttaacgcaatgattcag attaaggaccttaaggaaatcaaccgtcagatgtcgacgggtgaagctaaggcccgccgc gccaagcgcgaaatgattgaagccaacttgcgtctggtcatttcgattgctaagaaatac accaaccgtggtttgcagttcctcgacctgattcaggaaggcaatattggcctgatgaaa gcggtagataagtttgaatatcgccgtggttacaagttctcaacctacgcaacatggtgg attcgccaagcgattacccgttcgattgccgatcaggcccgtactattcgtattccggta cacatgatcgaaacaatcaacaagatgaaccgcattcagcggcaaatcttgcaggaaacc ggcattgagccgactcctgacgagcttgctgaaaaaatggaaatgccggaagacaagatc cgcaaaatcctcaagatcgccaaagagccgatctcgatggaaacgccgatcggtgacgac gacgattcccatttgggcgattttatcgaagactcaaacaatctggctccagccgaagcc gctatctacgcaggcctgcgtgaagcgacgaaggaagtgctggatactctgactccacgt gaagctaaagtgctgcgtatgcgctttggtatcgatatgaacaccgatcacacgctggaa gaagtgggtaagcagtttgatgttacgcgtgagcgtattcgtcagatcgaagccaaggct ttacgtaagcttcgccacccgactcgttcagaaagactgaaaagttttgttgaaagtcag gccagcgaaggttaa

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