Janthinobacterium sp. B9-8: VN23_21000
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Entry
VN23_21000 CDS
T04271
Name
(GenBank) hypothetical protein
KO
K11720
lipopolysaccharide export system permease protein
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VN23_21000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jab02000
]
VN23_21000
Transporters [BR:
jab02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
VN23_21000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
DUF6107
DUF1427
Motif
Other DBs
NCBI-ProteinID:
AMC36886
LinkDB
All DBs
Position
complement(4678410..4679489)
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AA seq
359 aa
AA seq
DB search
MSLLSRYLMRELSLFILFALIGLLGLYTFFDLIAELTDLGVGGYRLSDALIYVALRAPAN
AYELLPIAVLIGGIFGLSHLSGSSELTVIRASGVSLKRLLLWLCLIGAFYGVITLLLGEY
IAPAGKRMANQHRLAATQSMLVGDFRSGVWIKDGKQIVNIGEMLPDLTVVNARIYEFGKT
LTLDRVIEGHNGRFQSKGNWTLQKATITQFLPEHAGVVLTKPAVFNWQTSISPAMLAVLL
VEPAQMSATSLLSYIDHLKRNKQKTSRYELALWGKLFYPLACLSMVLIALPFAQTQKRSS
NAGVRVFIGIACGLVFHFANQIVVYLGDLYNWPPPIVVSIPTLLFLSAAGLMLWRQERR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttatctcgctatttaatgcgtgaattatcgctgtttattttatttgccctg
atcggcctgcttggcctttacactttttttgatctcattgccgagctcaccgacctaggc
gttggcggctaccgccttagcgatgcactgatttacgtggccctgcgtgcgcccgccaat
gcctacgagttgctgcccattgctgtgctgattggcggcatcttcggcctatcgcattta
tccggctcgtccgagctgacggtgattcgcgcttcgggtgtatcccttaaacgtctcttg
ctctggctttgcctgattggtgcgttttatggcgtgattaccctgctcttgggtgaatac
attgcccctgcgggcaaacgcatggccaatcagcatcgcttagccgccacgcaatccatg
ctggtaggggatttccgatccggcgtgtggattaaagatggcaagcaaattgtaaatatc
ggcgagatgctgcccgacctcaccgtagtgaatgcgcggatttatgaatttggcaaaaca
ctgactttagatcgggtgatcgaagggcataacggccgctttcaaagcaagggcaactgg
acgctgcaaaaagccaccatcactcagtttctgcctgagcacgcaggcgttgtactcaca
aaacctgccgtatttaattggcaaacgtcgatctcccctgccatgctcgcggtgctcttg
gtagagcctgcacaaatgtcagccacctctttactcagctatatcgaccacttaaagcgc
aataaacaaaaaacatcacgctatgagctggcgctttggggcaaattattttacccattg
gcctgcttatctatggtgctgattgcgctaccttttgcccagactcaaaaacgcagcagt
aatgcaggcgttcgcgtgtttatcggcattgcctgtggcttggtatttcactttgccaat
cagatagtggtttatttgggcgatttatataactggccaccaccgatcgttgtttctatc
cctactctgctgtttctatctgcagcgggattgatgctatggcgacaagagcggcgctaa
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