Janthinobacterium aestuarii: OPV09_03790
Help
Entry
OPV09_03790 CDS
T11009
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jae Janthinobacterium aestuarii
Pathway
jae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OPV09_03790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jae03021
]
OPV09_03790
Transcription machinery [BR:
jae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OPV09_03790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
PhyR_sigma-like
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_28
HTH_38
HTH_17
TnsD
HTH_11
PCI
HTH_24
HTH_SB
Motif
Other DBs
NCBI-ProteinID:
WWO47250
UniProt:
A0ABZ2GSA2
LinkDB
All DBs
Position
846059..846577
Genome browser
AA seq
172 aa
AA seq
DB search
MSTAELALQQQVSSLYTDHHHWLRGLLRRKLGNAFDAADLAHDVYLHLMKTGRVPPAGES
RRHLTQIANGMVIDLYRRRQIETAYLEVLALVPEALAPSEEERALVIEALTEIDAVLHQL
PAKARKALLLCKLDGLSYRDIATELQVSVSSVEKYIAAGLLACYQAMHTQGA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgccgagttagcgcttcagcagcaagtcagcagtctgtacaccgaccaccat
cactggctgcgtggcttgctgcgccgtaaactcggcaatgccttcgatgcggccgacctg
gcgcacgacgtgtacctgcacctgatgaagacgggcagggtgccgccggccggggagtcg
cgccgccatctgacgcagatcgccaacggcatggtcatcgacctgtaccgccgccgccag
atcgaaacggcctacctggaagtgctggccctggtgcccgaagcgctggcgccgtccgag
gaagagcgcgcgctggtgatcgaggcgctgacggaaatcgatgccgtgctgcaccagctg
cccgccaaggcacgcaaggccttgttgctgtgcaaactcgatggcctgagctaccgcgac
attgccaccgaattgcaggtgtccgtctcgtccgtcgaaaaatacatcgccgccggcctg
ctggcctgctaccaggccatgcacacccaaggcgcctga
DBGET
integrated database retrieval system
