KEGG   Janthinobacterium aestuarii: OPV09_04115
Entry
OPV09_04115       CDS       T11009                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
jae  Janthinobacterium aestuarii
Brite
KEGG Orthology (KO) [BR:jae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:jae03016]
    OPV09_04115
Enzymes [BR:jae01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     OPV09_04115
Transfer RNA biogenesis [BR:jae03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    OPV09_04115
 Prokaryotic type
   tRNA splicing ligases
    OPV09_04115
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: WWO47311
UniProt: A0ABZ2GPF2
LinkDB
Position
914069..915280
AA seq 403 aa
MPIHQTLRGAHVPVHIFTDDIDAQALRQLHNIASLPIVHPYVAAMPDVHAGIGATVGSVI
PTRGAIIPAAVGVDIGCGMNAVRTTLTASDLPDNLARLRSAIEADVPVGFEQHDWSRVQG
SRHARAARPLAGRLEHIVERHRGIAKMLRQFERTWICQAGTLGGGNHFIEICLDEEQRVW
IMLHSGSRGIGNAIGRYFIAAAQKDMRRHQLRQLPDADLAYLSAGSTVFDDYVEAVDWAQ
DYALLNRSEMMRRVLDVLAKFAPPFQLDGEAINCHHNYIARETHGNADLYVTRKGAISAR
QGELGIIPGSMGARSFIVRGKGNPESLCSCSHGAGRSMSRSEAKRRYDRFDLAEQTAGIE
CRKDGGVVDEIPAAYKNIDAVMAHQSDLVEVVHTLRQVVCIKG
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgcccattcatcagaccttgcgcggcgcccatgtgcccgtgcatatttttaccgacgat
atcgacgcgcaggcattgcgccagctgcacaatatcgccagcctgcccatcgtccatcca
tatgtggcggccatgcccgatgtgcatgccggcatcggcgccaccgtcggcagcgtgatt
ccgacgcgcggcgccatcattccggccgccgtgggcgtggacatcggctgcggcatgaac
gccgtgcgcaccaccctgacggccagcgacttgcccgacaacctggcgcgcctgcgcagt
gccatcgaagcggacgtgcccgtcggcttcgagcagcacgactggagccgcgtgcagggt
tcgcgccatgcacgcgccgcgcgtcccctcgccggccgcctggagcacatcgtcgagcgt
caccgcggcatcgccaagatgctgcgccagttcgaacgcacgtggatctgccaggccggc
accctcggcggcggcaaccatttcatcgagatctgcctcgacgaggagcagcgggtatgg
atcatgctgcattcgggctcgcgcggcatcggcaacgccatcggccgatacttcatcgcc
gccgcgcagaaggacatgcggcgccaccagctgcggcaactgccggacgcggatctggca
tacctgagtgcaggctccacggtgttcgacgactatgtggaagcggtggactgggcgcag
gattatgcgctgctcaaccgcagcgagatgatgcgccgcgtgctcgacgtgctggcgaag
tttgcgccgccgttccagctcgacggagaggccatcaactgccaccacaactacatcgcg
cgcgaaacgcatggcaatgccgacttgtacgtgacgcgcaagggcgccatttcggcgcgg
cagggggagctgggcatcatccccggcagcatgggcgcgcgcagcttcatcgtgcgcggc
aagggcaatccggagtcgttgtgttcctgctcgcacggagcggggcgcagcatgagccgc
agcgaggcgaagcgccgttacgaccgcttcgatctggccgagcagactgccggtatcgaa
tgccgcaaggatggcggcgtggtcgacgagattccggccgcctataaaaatatcgacgcc
gtgatggcgcaccagagcgacctggtggaggtggtgcataccttgcgccaggtcgtctgc
atcaagggttga

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