Janthinobacterium aestuarii: OPV09_05430
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Entry
OPV09_05430 CDS
T11009
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
jae Janthinobacterium aestuarii
Pathway
jae03030
DNA replication
jae03410
Base excision repair
jae03420
Nucleotide excision repair
jae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OPV09_05430 (polA)
03410 Base excision repair
OPV09_05430 (polA)
03420 Nucleotide excision repair
OPV09_05430 (polA)
03440 Homologous recombination
OPV09_05430 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jae03032
]
OPV09_05430 (polA)
03400 DNA repair and recombination proteins [BR:
jae03400
]
OPV09_05430 (polA)
Enzymes [BR:
jae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OPV09_05430 (polA)
DNA replication proteins [BR:
jae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OPV09_05430 (polA)
DNA repair and recombination proteins [BR:
jae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OPV09_05430 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OPV09_05430 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF2167
Motif
Other DBs
NCBI-ProteinID:
WWO47563
LinkDB
All DBs
Position
1199813..1202575
Genome browser
AA seq
920 aa
AA seq
DB search
MQNTLLLVDGSSYLYRAFHALPDLRSPDGYPTGAMHGMVNMLRRLRADYPAAYIACVFDA
KGKTFRDDMYPEYKATRASMPDDLRLQIEPIHEAVRAMGWPILMVDGVEADDVIGTLAVQ
AAAAGMNVVVSTGDKDLAQLVNSQVTLINTMSNEKLDEAAVLVKFGVPPNRIIDYLSLIG
DTVDNVPGVSKCGPKTAVKWLTLYDSLEGVMENAASVGGAVGENLRTALPWLPQARALIT
VKTDCDLSGHMTTIADSLVAKHEDKEALLAFFNRYGFKALLRELGAAAPPMSPVGAPTVA
GATIANTTGDMFADAAPAVEAVYETVLTDEQLDKWIALIDAAPLTAVDTETTSLEPMTAQ
MVGISLSVAEHAACYIPLAHDYAGAPEQLTREHVLAKLRPWLEDANKPKLGQNLKYDSHI
FANHGVTLRGIAHDTLLESYVFESHKKHDMDSLALRHLNYTTIPFEDVCGKGAKQITFNQ
VEVEQAAKYAAEDADVTLRLHNAMWGNVAGDDKLTFIYEKIEMPTAVVLQKIERNGVLID
DELLNIQSAELAVKILELEKKAYELAEQPFNLGSPKQIGEIFFEKLKLPVVKKTPTGAPS
TDEEVLQKLAEDYPLPKVLLEYRGMAKLKSTYTDKLPKMINVTTGRVHTNYAQAVAVTGR
LASNDPNLQNIPIRSAEGRRIREAFIAPPGSHIVSADYSQIELRIMAHISGDEAMLRAFA
DGIDIHRATAAEIFGVPAAEVQSEQRRYAKVINFGLIYGMSAFGLAGNLGVDRTAAQSYI
DRYFARFSGVKQYMEDTRQQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPM
QGTAADLIKLAMIAVQGWLETDNLQTKMIMQVHDELVLEVPDAELELVKRKLPELMASVA
ALKVPLTAEVGVGKNWDEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaccctgctgttagtcgacggttccagttacctttatcgtgccttccatgcg
ctgcccgacttgcgcagcccggacggctatcccacgggcgccatgcacggcatggtcaac
atgctgcgtcgtttgcgcgccgactatccggccgcctacatcgcctgcgtgttcgatgcc
aaagggaaaactttccgcgacgacatgtatccagagtacaaggccacacgcgcttcgatg
ccggacgacctgcgcttgcagatcgaaccgatccacgaagccgtgcgcgccatgggctgg
ccgattttgatggtcgacggcgtggaagcggacgacgtgattgggactttggccgtgcag
gccgccgccgccggcatgaacgtggtggtgtcgacgggcgacaaggacctggcgcagctg
gtcaacagccaggtgaccctgatcaataccatgagcaatgaaaagctcgacgaagcggcc
gtgctggtcaagttcggcgtgccgccgaaccgcatcatcgattatctgtcgctgatcggc
gatacggtcgacaacgtgcctggcgtctcgaagtgcggcccgaagacggccgtcaaatgg
ctgaccttgtacgacagcctggaaggcgtgatggaaaacgcggccagtgtgggcggcgct
gtgggcgaaaacctgcgcacggccctgccatggctgccgcaagcgcgcgccttgatcacc
gtcaagaccgattgcgatttgtccgggcacatgacaacgatcgccgattcgctggtggcg
aaacacgaagacaaggaagcgctgctggccttctttaaccgctacggcttcaaggccctg
ctgcgcgaactgggcgcggcggcgccgccgatgtctcccgttggcgcaccgacagttgcc
ggtgccaccatcgcgaatacgacgggcgacatgttcgccgatgccgcgccagcagtcgag
gccgtgtatgaaaccgtgctgacggatgagcagctcgataaatggatcgcgctgatcgat
gcggcgcccttgacggctgtcgacacggaaactacgtcgctggaaccgatgacggcgcag
atggtcggcatttccctctccgttgccgaacatgccgcctgctacatcccgctggcccac
gattacgcgggcgcgccggaacagttgacgcgcgagcacgtgctggcgaaactgcgcccg
tggctggaagatgccaacaagcccaagctgggccagaacctgaaatacgacagccacatc
ttcgccaaccacggcgtgaccctgcgcggcatcgctcacgatactttgctcgaatcgtat
gtgttcgaatcgcacaagaagcacgacatggacagcctggccctgcgccacctgaactac
acgacgatcccgttcgaggacgtgtgcggcaagggcgccaagcagattaccttcaaccag
gtggaagtggagcaggcggcgaaatacgcggccgaagatgccgacgtcaccttgcgtttg
cacaatgccatgtggggcaatgtggcgggcgacgacaagctgaccttcatctatgaaaag
atcgagatgccgacggccgtggtcttgcaaaagatcgagcgcaacggcgtgctgatcgat
gatgagttgctcaacatccagtcggccgagctggccgtgaaaatcctggaactggaaaaa
aaggcgtatgaactggccgagcagccattcaatctcggttcgcccaagcagatcggtgaa
atcttcttcgagaaactgaaactgccggtggtcaagaaaaccccgactggcgcgccatcg
acggatgaagaagtgctgcaaaagctggccgaggattatccattgcccaaagtgctgctc
gaataccgcggcatggccaagctgaagtcgacctacacggacaaattgccgaagatgatc
aacgtcacgacgggccgcgtgcacacgaactatgcgcaagccgtggccgtgacggggcga
ttggcgtcgaacgacccgaacttgcagaatattcccatccgtagcgcggaaggccgccgc
atccgcgaagccttcattgcgccgcccggcagccacatcgtctcggccgactattcgcag
atcgaattgcgcatcatggcgcatatctctggcgacgaagccatgctgcgcgcgtttgcc
gacggcatcgacattcaccgcgccacggccgccgaaatctttggtgtgccagccgcggaa
gtgcagagcgaacagcgtcgctacgccaaggtcatcaacttcggcctgatctacggcatg
agcgcattcggcctggccggtaacctgggcgtggaccgtacggccgcgcaaagctatatc
gaccgctacttcgcgcgtttttctggcgtgaaacagtacatggaagacacgcgccagcaa
gcgaaggcgcgcggctacgtggaaaccgtgttcggccgccgtttgtggttgccggaaatc
aattcgccaaacggcccgcgccgccagggcgccgaacgggcggcgatcaacgcgccgatg
cagggcacggccgccgacctgatcaagctggccatgatcgccgtgcaaggctggctggaa
acggacaacttgcagacgaagatgatcatgcaggtgcacgatgaactggtgctggaagtg
ccggatgcggaactggaactggtcaagcgcaagctgccggaactgatggccagcgtggcc
gcgctgaaggtgccgctgacggcggaagtgggcgtcggtaaaaattgggacgaagcgcat
taa
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