Janthinobacterium aestuarii: OPV09_10955
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Entry
OPV09_10955 CDS
T11009
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jae Janthinobacterium aestuarii
Pathway
jae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OPV09_10955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jae03021
]
OPV09_10955
Transcription machinery [BR:
jae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OPV09_10955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
PhyR_sigma-like
Sigma70_ECF
HTH_Mga
TnsD
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WWO48578
UniProt:
A0ABZ2GS07
LinkDB
All DBs
Position
complement(2412580..2413098)
Genome browser
AA seq
172 aa
AA seq
DB search
MLSAPSPPSDFQALYAEHHSWLLHWLKRRLHDAGLAGDLAQDTFIKIFVARSSAGIAQPR
PFLATIAKRLLANHCRREELERAYLDALLHQPQASTPSPEAMSILLESLQLVDRALDQLS
AKARAAFLLAHLDGMTYAEIAAELDTTTHSVKKYLSKANLLCFFAVPDFAAS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccgccccttcccctccgtccgacttccaggccctgtatgccgagcaccattcc
tggctgctgcactggctgaagcgccgcctgcacgatgcggggctggccggcgacctggcg
caggataccttcatcaagatcttcgttgcgcgcagcagtgccgggatcgcgcagccacgc
cctttcctggccaccatcgcgaagcgcctgctggccaaccactgccggcgcgaagaactc
gaacgggcttacctcgacgccctgctgcaccagccgcaagcgagcacgccgtcgccggaa
gcgatgtccatcctgctcgaatcgctgcagctggtcgaccgcgcgctggaccagctgtcc
gccaaggccagggccgctttcctgctggcacacctggacggcatgacctacgccgagatc
gccgccgaactggacaccaccacgcattccgtcaaaaaatacctgagcaaggccaacctg
ctatgcttttttgccgtgcccgattttgccgcgtcctga
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