Janthinobacterium aestuarii: OPV09_11135
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Entry
OPV09_11135 CDS
T11009
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jae Janthinobacterium aestuarii
Pathway
jae03420
Nucleotide excision repair
jae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OPV09_11135
03430 Mismatch repair
OPV09_11135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jae03400
]
OPV09_11135
Enzymes [BR:
jae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OPV09_11135
DNA repair and recombination proteins [BR:
jae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OPV09_11135
MMR (mismatch excision repair)
Other MMR factors
OPV09_11135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WWO48612
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All DBs
Position
2459395..2461341
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AA seq
648 aa
AA seq
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MSTDNAPQFIPKRITPTPEQVAIQTAQKKVVLIDANAGAAKTTTLALRLAEALHRGRAPE
RMLALVFTEAARVALRQRLLEVGVPLGVVKRLTVDTFDAFAAKVLLQLENMQVAAMRSDE
ELRPIAWEALEVVSEKYAHRYPLEINTTNGAIAEFLKLQLRTKARLDFQNPDFESNSLDD
NLELLGMSRTHYLWLREYEGLRGADTGDIQFRAPFDATYDLVRMLDGDEPLRQQLPAFQI
IVADELHDLNEASFRLLTMLIRRGNAFFCGAGDKDQVIYTWSGADHRFLRQRFEQEFPTL
QRLPLTASYRYGPQLAQAVGVLKNKASVSALTRATHIELLEYDHAQPQACSAQLIAALEH
AHAGTTAILLRDRDQAIRVETALFQSGIAYGLVDMNSYLLSLEVLMLRGMVAIARKDLHA
IKSGPRRGEILEALVAFAEIPFTRAELQQAKADVANYPDLLEGFLTNQLAKSQNQDKAAL
TLAAVDYLRALPPDALAGDALQHIFGLMQLEQTARRIYVDPAQARVVARSLHGFIAVCSE
AGVALGGFAGWLGEMEEAVTVSTGKAKLVIACIDQIKGLEYNHVILPYLAVDEFPRSKTD
PLEEENRFYVAATRARDRLTLLTPEDPAYRSRYIAALQLKQKIIASKS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacagataacgccccgcagttcattcccaaacgcatcacgcccacgccggagcag
gtcgccatccagacggcgcaaaagaaggtggtcttgatcgacgccaatgccggcgcggcc
aagacgacgaccctggccctgcgcctggccgaagcgctgcaccggggacgcgcgcccgaa
cgcatgctggccctcgtcttcacggaagcggcgcgcgtggccctgcgccagcgcctgctg
gaagtgggtgtgccgctcggtgtcgtcaagcgcctgacggtcgacaccttcgacgccttt
gccgccaaggtgctgttgcagctggaaaacatgcaggtggcagccatgcgcagcgatgaa
gagctgcgcccgattgcctgggaagcgctggaagtcgtgtcggaaaaatatgctcaccgc
tatccgctggaaatcaacacgacgaacggggccatcgccgaattcttgaaattgcagctg
cgcaccaaggcgcgcctcgatttccagaatcctgacttcgagagcaattccctggacgac
aacctggagctgctgggcatgtcgcgcacgcattacctgtggctgcgcgaatatgaaggc
ttgcgcggcgccgacacgggcgacatccagttccgcgcaccgttcgacgccacctacgac
ctcgtgcgcatgctcgacggcgacgagccgctgcgccagcaattgccggccttccagatc
atcgtggccgatgaattgcacgatttgaatgaagcgtcgttccgcctgttgaccatgctg
atacgccgcggcaacgcgtttttctgcggcgccggcgacaaggatcaagtcatttacacg
tggtcgggcgccgaccaccgcttcctgcgccagcgcttcgagcaggaattccccaccttg
cagcgcttgccattgacggcatcctaccgctacggcccgcaattggcgcaggccgtgggc
gtgctgaaaaacaaggccagcgtgtcggctctcacgcgcgccacccacatcgagctgctc
gaatatgaccacgcgcagccgcaggcgtgcagcgcccagctgatcgccgcgctcgaacac
gcgcatgcgggcacgacggccattttgctgcgcgaccgcgaccaggccatccgcgtggaa
acggcgctgttccagagcggcatcgcgtatggcctggtggacatgaacagctatctgctg
agcctggaagtgctgatgctgcgcggcatggttgccatcgcccgcaaggatttgcatgcg
atcaagagcggcccgcgccgcggcgagatcctcgaagccctggtggcgttcgcggaaatc
ccgtttacacgcgcggagctgcagcaagccaaggccgacgtggccaactatcccgacttg
ctggaaggcttcttgacgaaccagctggccaagtcgcagaaccaggacaaggcggcgctg
accctggccgccgtcgattatctgcgtgcgctgcctcccgatgcgctggcgggtgacgcg
ctgcagcacatctttggcttgatgcagctggaacagacggcgcgccgcatctacgtcgat
ccggcccaggcgcgggttgtcgcccgctccctgcacggttttatcgccgtgtgcagcgaa
gcgggcgtggcgctgggcggctttgccggctggctgggcgagatggaagaggccgtgacg
gtctcgaccggcaaggccaagctggtcatcgcctgcatcgaccagatcaagggcctcgaa
tacaaccatgtgatcttgccctacctggccgtcgacgaattcccgcgcagcaagaccgac
ccgctggaagaggaaaaccgtttctatgtggccgccacgcgcgcgcgcgacaggctcacc
ttgctcacgccggaggatcccgcctaccggagccgttacatcgccgccctgcagctgaaa
cagaagattattgcctcaaagtcatag
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