Janthinobacterium aestuarii: OPV09_16905
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Entry
OPV09_16905 CDS
T11009
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jae Janthinobacterium aestuarii
Pathway
jae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OPV09_16905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jae03021
]
OPV09_16905
Transcription machinery [BR:
jae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OPV09_16905
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
HTH_29
GerE
HTH_28
HTH_11
DUF1670
HTH_SB
Motif
Other DBs
NCBI-ProteinID:
WWO44400
UniProt:
A0ABZ2GJK2
LinkDB
All DBs
Position
complement(3795682..3796188)
Genome browser
AA seq
168 aa
AA seq
DB search
MNIAQSSESIAGIYSSHHGWLMRWLRAKLQCADHAADLAHDTFVRLLMAPPENRQSLREP
RAYLTTVAQRLLIDHYRRLSLEQAWLETLAQQPELLMQSPEERLLVREALQRIDAMLDGL
PPLVRSAFLLAHVDGLGYGEIARRLAVSERSIKRYMVQAFERCILLIL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
gtgaacattgcgcagtccagcgagtcgatagccggcatctacagcagccaccacggctgg
ctgatgcgctggctgcgcgccaagctgcagtgcgccgaccatgcggccgacctggcgcac
gataccttcgtgcgcctgctgatggcgccgccggagaaccggcaaagcttgcgcgagccg
cgcgcctacctgacgaccgtggcgcagcgcctgctgatcgaccattaccggcgcctctcg
ctggagcaggcctggctggaaacgctggcgcagcaacctgaattgctgatgcaatcgccg
gaagagcggctgctcgtgcgtgaagctctgcagcgcatcgatgccatgctcgacggcttg
ccgccgctcgtgcgcagcgccttcctgctggcccatgtcgatggcctcggctacggggaa
atcgcccggcgcctggccgtgagcgagcgtagcatcaagcgctatatggtgcaggcgttc
gagcgctgcattctgttgatcctgtga
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