Janthinobacterium aestuarii: OPV09_21160
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Entry
OPV09_21160 CDS
T11009
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
jae Janthinobacterium aestuarii
Pathway
jae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OPV09_21160 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jae03019
]
OPV09_21160 (pnp)
03016 Transfer RNA biogenesis [BR:
jae03016
]
OPV09_21160 (pnp)
Enzymes [BR:
jae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OPV09_21160 (pnp)
Messenger RNA biogenesis [BR:
jae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OPV09_21160 (pnp)
Transfer RNA biogenesis [BR:
jae03016
]
Prokaryotic type
tRNA degradation factors
OPV09_21160 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH_KhpA-B
DUF5813
OB_RRP5_4th
KH-I_KHDC4-BBP
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
WWO45200
UniProt:
A0ABZ2GL88
LinkDB
All DBs
Position
complement(4705455..4707572)
Genome browser
AA seq
705 aa
AA seq
DB search
MFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVARKDAKPGQDFFPLT
VDYVEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV
NPEIDPDIAAMIGASAALCVSGVPFNGPIGAARVGYANGQYILNPTVQQLKTSEMDLVVA
GTETAVLMVESEAKQLSEEIMLGAVVFGHDQMKVVIDAIHDLVRDGGKPEVEWAPAPKNE
ALIARVAHFANAKINDAYQTKDKQERTAKLKAATSEVIADLSAEVAATGGAAIDSAEVNN
ILFDIEAKIVRTQILDGEPRIDGRDTRTVRPISIRTSVLPRTHGSALFTRGETQALVVAT
LGTARDSQKIDALMGEFTDSFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL
PAAEEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKEHVAGIAMGLIKEGGKF
AVLSDILGDEDHLGDMDFKVAGTRNGITALQMDIKIMGITKEIMQVALAQAKEGREHILG
EMQKAMPHVKTELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV
TIASVDAAAGQEAKRRIEELTASVEVGKTYEGTVLKLLDFGAIVQVMPGKDGLLHISQIA
NERVNAVADYLKEGQLVRVKVLETDDRGRLKLSMKAAEGNEAPAA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaagttacgaaaaccttccagtacggtcaacatcaagtgaccctggaaacc
ggcgaaatcgcacgtcaggcatccggcgcagtgctggtgtcgatcgaagataccgtcgtt
ctggcaacggtagtggcacgcaaagatgccaaaccaggccaggatttcttccctttgacg
gttgattatgtcgagaaaacctatgctgccggtaaaatcccgggcggttttttcaagcgc
gaaggccgtccttccgaaaaagaaacactgacctcccgtctgatcgaccgtcctatccgt
ccgctgttcccggaaggctacctgaatgaagtgcaagtcatcattcacgtgttgtcggtc
aaccctgaaatcgatccggacatcgccgccatgatcggcgcatcggctgccctgtgcgta
tcgggcgtgcctttcaacggtcctatcggcgccgcgcgcgtcggttacgcgaatggccag
tacatcctgaacccgaccgtccagcaactgaaaacgtcggaaatggacctggttgtcgcc
ggtaccgaaacggccgtgctgatggtcgaatcggaagcgaaacagctgtccgaagaaatc
atgctgggcgccgtggtcttcggccacgaccagatgaaagtcgtcatcgacgcgattcac
gacctggtgcgtgacggcggcaagccggaagtcgaatgggcgcctgcgccgaaaaacgaa
gcactgatcgcccgcgtcgcgcatttcgccaacgccaagatcaatgacgcgtatcaaacc
aaggacaagcaagagcgtacggccaagctgaaagcggcgacgtcggaagtgatcgccgac
ctgtcggctgaagtggctgccaccggcggcgcggctatcgacagcgctgaagtgaacaac
atcctgttcgacatcgaagcgaaaatcgtgcgtacgcaaatcctcgacggcgagccacgc
atcgacggccgcgacacgcgcaccgtgcgtccgatctcgatccgcaccagcgtgctgcca
cgcacccacggttcggccctgttcacgcgcggcgaaacgcaagcgctggtcgtggcaact
ttgggcaccgcccgcgacagccagaagatcgatgcgctgatgggcgagttcaccgattcg
ttcatgctgcattacaacatgcctccgttcgccaccggcgaaacgggccgtgtcggtacg
cctaagcgccgcgaaatcggccacggccgcctggccaagcgcgcgctgatcgccgccctg
ccagcagctgaagagttcagctactcggtgcgtctggtatcggaaatcacggaatcgaac
ggttcctcgtcgatggcttccgtctgcggcggctgcctggcactgatggacgccggcgtg
ccgatgaaagaacacgtggccggtatcgccatgggcctgatcaaggaaggcggcaagttt
gccgtgctgtccgacatcctgggcgacgaagatcacctgggcgacatggacttcaaggta
gccggtacccgcaacggtatcacggcgctgcagatggacatcaagatcatgggcatcacc
aaggaaatcatgcaagtggcactggcgcaagccaaggaaggccgcgagcacatcctgggc
gaaatgcaaaaagccatgccgcacgtcaaaaccgaactgtccgatttcgcaccgcgtctg
atcaccatcaagatcaacccggaaaaaatccgtgacgtgatcggcaagggcggcgccgtg
atccgtgcgctgaccgaagagacgggcacccagatcgacatcagcgacgaaggcgtggtc
accatcgcttccgttgacgctgctgccggccaggaagccaagcgccgcatcgaagaactg
accgcttccgtcgaagtgggcaagacctacgaaggcaccgtgctgaaactgctggacttc
ggcgccatcgtccaagtcatgccaggcaaggacggcttgctgcacatctcgcagatcgcc
aacgagcgcgtcaacgccgtggccgactacctgaaagaaggccagctggttcgcgtcaag
gttctggaaacggacgaccgcggccgtctgaaactgtcgatgaaagctgctgaaggcaac
gaagcgccagccgcttaa
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