Janthinobacterium aestuarii: OPV09_24905
Help
Entry
OPV09_24905 CDS
T11009
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jae Janthinobacterium aestuarii
Pathway
jae03030
DNA replication
jae03430
Mismatch repair
jae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OPV09_24905 (dnaE)
03430 Mismatch repair
OPV09_24905 (dnaE)
03440 Homologous recombination
OPV09_24905 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jae03032
]
OPV09_24905 (dnaE)
03400 DNA repair and recombination proteins [BR:
jae03400
]
OPV09_24905 (dnaE)
Enzymes [BR:
jae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OPV09_24905 (dnaE)
DNA replication proteins [BR:
jae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OPV09_24905 (dnaE)
DNA repair and recombination proteins [BR:
jae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OPV09_24905 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WWO45903
UniProt:
A0ABZ2GMU5
LinkDB
All DBs
Position
complement(5533933..5537472)
Genome browser
AA seq
1179 aa
AA seq
DB search
MQEAGAPAGSQQAMQPGPAFVHLRVHSEYSIVDGLVRIDDVVKAAAKDKQVALAVTDLSN
LFGMVKFYKEARGKGIKPIVGVDVWITNDDNREKPSRLLLLAKNRMGYLQLCELLSTAWL
TNQYKGRAELRIEWLQALATNTYDLYPGESAANGLIVLSGAHFGDVGTAIENGNLALAER
NAQRWAEIFPGHFYIEIQRGGQANQEAQVRHAVALAAKLGLPVVATHPVQFISPEEFIAH
EARTCIAEGEMLANAKRVKRFNDSQRFLSQADMAELFADLPAALANSVEIAKRCNLTLTL
GKPQLPNFPTPDGMTIDQFLVAESQAGLEKRLLQLYPDPERREKERPRYESRLKFETDTI
CNMKFPGYFLIVAEFIQWAKENGVPVGPGRGSGAGSLVAYSLLITDLDPLQYNLLFERFL
NPERVSMPDFDIDFCQEGRDRVIQHVKDLYGKEAVSQIATFGTMAAKGAIRDVGRVMDFG
YNFCDGISKLIPFKPGKPVSIADAIEEEPLLKERLENEEEVKQLLDLAQQVEGITRNIGM
HAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVR
YIKQLDPAQANFDLATLPLNDKPSYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDII
ALVALYRPGPMDLIPDFCKRKHGERFDYPDPRTESILSETYGIMVYQEQVMQMAQIVGGY
SLGGADMLRRAMGKKKAEEMAEHREIFRAGAAKDGLTAEKADEIFDLMEKFAGYGFNKSH
AAAYALLSYHTAYLKAHHTAAFMAANLSLAMDDTDKIKILVEDSLEICKLTLLPPDINES
DYRFTPSGAPPSVSGKKVTQIRYGLGAVKGSGQNAIEAIIAAREAGGPFTSLFDFCKRVD
KKQINRRTIESLIRSGAFDCLKVDRAILLASVAFAMECADQAAKAANQVSLFGGDDSDMV
APPEYVKVPLWTDKQRLTEEKIALGFYLSGHLFDSYAPEARRFARTKLSELSPSREPRMM
AGVITGLRTQMTQRGKILIVTLDDKSGTVEVTVYGELFDSNRKIFKEDEFLAVVGKVSED
RFSGGLRITAESAFDIIAARVQYGRQLGLTLPATLDAKRIRDVIMPHRAETGLPIAARVS
PQGVSCVLQFGDEWKVAPSDELQMALEQMLGAQEVAVEY
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggccggcgctccggcaggttcacagcaagcgatgcagcccggtcctgctttc
gtccatttgcgcgtgcactcggagtactcgatcgtcgatggcctggtgcgcatcgacgac
gtcgtcaaggcggcggcgaaggacaagcaggtggcgctggccgtcaccgacctgtcgaac
ctgtttggcatggtcaagttctacaaggaagcgcgtggcaagggcatcaagcccatcgtc
ggcgtcgacgtgtggatcacgaatgacgataaccgcgaaaaaccatcgcgcttgctgttg
ctggcgaagaaccgcatgggctatctgcagctgtgcgaactgctgtcgacggcctggctg
acgaaccagtacaagggccgcgccgagttgcgcatcgagtggctgcaggcgctggcgacg
aatacctacgacttgtacccgggcgaaagcgcggccaatggcttgatcgtgctgtccggc
gcgcacttcggcgatgtcggtaccgccatcgagaatggcaacctggccctggccgagcgc
aacgcgcagcgctgggccgagattttccccgggcatttctatatcgaaatccagcgcggc
ggccaggccaaccaggaagcgcaggtgcgccatgcggtggcgctggcggccaagctgggc
ttgcccgtggtggccacgcatcccgtgcaattcatttcccctgaagaatttattgcccac
gaagccaggacctgtatcgccgaaggcgaaatgctggccaacgccaagcgcgtgaaacgg
tttaatgacagccagcgcttcctgtcgcaggctgacatggccgaactgttcgccgacttg
ccggctgcgctggccaattccgtggaaatcgccaagcgctgcaatttgaccttgaccctg
ggcaagccgcagttgccgaacttccccacgccggacggcatgacgatcgaccagttcctc
gtcgccgaatcgcaagcgggcctggaaaagcgtttgttgcagttgtatcccgatcccgag
cgccgtgaaaaggagcgtccgcgctacgagtcgcgcctgaaattcgagacggatacgatt
tgcaacatgaaattccccggctacttcctcattgtggccgagtttatccagtgggccaaa
gaaaacggcgtgcccgtcggtccgggccgcggttcgggcgcgggttcgctggtcgcgtat
tcgctgctcattaccgaccttgatccattgcagtacaacttgctgttcgagcgctttttg
aatcccgaacgcgtctcgatgcccgacttcgatatcgacttttgccaggaagggcgcgac
cgggtcatccagcacgtcaaggatttgtatggcaaggaggccgtctcgcagatcgccacc
ttcggtaccatggcggccaagggcgcgatccgcgacgtgggccgcgtgatggatttcggc
tataacttctgcgacggcatctcgaagctgatcccgttcaagccgggcaaacccgtgtcg
atcgccgacgccattgaagaggaaccgctgctcaaggagcgcctggaaaacgaggaagag
gtcaagcagctgctggacctggcgcagcaagtcgaaggcatcacgcgcaatatcggcatg
cacgcggggggcgtgttgattgctcccggcaagctgacggatttctgcccgctgtacacg
cagggcggcgattccggcgttgtgtcgcagtacgacaaggatgacgtggaggccgtcggc
ctcgtgaagttcgactttttgggtctgacgaccctcaccatccttgaccgcgctgtgcgc
tacatcaagcagctcgatccggcgcaggccaatttcgacctggccaccttgccgctgaat
gacaagccgtcgtacgacttgctgaccaaggccaagaccgtcgccgtgttccagctcgag
tcgcgcggcatgcagggcatgctgaaagacgcgcgtcccgaccgtttcgaagacattatc
gcgctggtggccttgtaccgtccgggcccgatggacctgattcccgacttctgcaagcgc
aagcacggcgaacgttttgattatcccgatccgcgcacggaatcgattctgtccgaaacc
tacggcatcatggtgtatcaggagcaggtgatgcagatggcgcagatcgtcggtggctac
tcgctgggcggcgccgacatgctgcgccgcgccatgggtaagaagaaggccgaagagatg
gccgagcaccgcgagatcttccgcgccggtgcggcgaaagacggcttgacggcggaaaag
gccgacgagatcttcgacttgatggaaaagttcgccggctacggtttcaataaatcgcac
gccgccgcctacgccttgctgtcgtaccacactgcttacctgaaagcgcaccacacggcc
gccttcatggcagccaacttgtcgctggccatggatgacacggacaagatcaagattctg
gtggaagactcgctggaaatctgcaagctgaccttgttgccgccggatatcaacgaatcc
gattaccgcttcacgccgagcggtgcgccgccgtccgtgagcggcaagaaagtcacgcag
atccgctatggcctgggcgccgtgaagggttcgggccagaatgccatcgaagccatcatc
gccgcgcgcgaagccggcgggccgttcacgagtctgttcgatttctgcaagcgcgtggat
aaaaaacagatcaaccgccgcaccatcgagtccctgatccgcagcggcgccttcgattgc
ctgaaggtcgaccgcgccatcctgctcgcatccgtcgcgttcgccatggaatgcgccgac
caggccgccaaggcggccaaccaggtgagcctgttcggcggcgacgacagcgacatggtg
gcgccgcccgagtacgtcaaagtgcccctgtggaccgataaacagcgattgacggaagaa
aagatcgcgctgggtttctatttgtccggccacctgttcgattcgtatgcgcccgaggcg
cgccgttttgctcgcacgaaattgtcggaactgtcgccgtcgcgcgaaccgcgcatgatg
gccggcgtcatcacgggcttgcgcacgcagatgacgcagcgcggcaagatcctcatcgtc
accctggacgacaagagcggcacggtggaagtgacggtgtatggcgaattatttgactcc
aaccggaaaatcttcaaggaagatgaattcctggccgtcgtgggcaaggtgtcggaagac
cgtttttcgggcggcttgcgtatcacggccgagagcgccttcgacatcatcgccgcgcgc
gtgcagtatggccgccagctgggcctgaccttgccggccaccctggatgccaagcgcatc
cgcgacgtgatcatgccgcaccgggccgaaacgggcttgccgattgccgcgcgggtcagc
ccgcagggcgtcagttgcgtgctgcagtttggtgatgagtggaaagtggcgccatcggat
gagttgcagatggcgctcgagcaaatgctgggcgcacaagaggtggcggtcgaatactga
DBGET
integrated database retrieval system
