Janthinobacterium aestuarii: OPV09_27000
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Entry
OPV09_27000 CDS
T11009
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
jae Janthinobacterium aestuarii
Pathway
jae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OPV09_27000 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jae03019
]
OPV09_27000 (pcnB)
Enzymes [BR:
jae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
OPV09_27000 (pcnB)
Messenger RNA biogenesis [BR:
jae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OPV09_27000 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
DUF2204
Motif
Other DBs
NCBI-ProteinID:
WWO46295
UniProt:
A0ABZ2GPG1
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All DBs
Position
5993064..5994440
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AA seq
458 aa
AA seq
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MIKKFIRKILGVKKEAARDTTAPIVLGPAQHGIDPKLVSSNAIRVTSSLQEAGFEAFVVG
GAVRDLLLGVKPKDFDIATNATPEQVKRLFRRAFIIGKRFQIVHVMFGQDLLEVTTFRGA
GADSAPKDEHGRVLRDNTFGLQHEDALRRDFTINAMYYNPATQEVLDYHGGVEDIRAKTL
RMIGKPEERYREDPVRMLRVVRFAAKLKFTIEPHTAAPIPVMAPLINNVPAPRVFDEMLK
LLMSGHALACLQQLRKEGLHHGLLPLLDVVLEQPLGAKFVTLALDATDQRIAAGKTVSPG
FLFASLLWHQVLEKWTAYRAAGESTIPALHLAADDVLDSQTEKLALQRKIGSDMRDIWSM
QPRFERRVGKAPYKLLEHLRFRAGYDFLLLRCASGEIDMDIGEWWTAFYEGDEETREALL
VSANAAPGAVKKKRPPRRSTRSKTSTGGGSTTGSTSGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaattcatccgcaagatcctcggcgttaaaaaagaggcagcgcgcgacacc
acggcacccatcgtgctcggtcctgcgcaacacggaatcgacccgaaactggtgtcgtcg
aatgccatccgcgtcaccagcagcctgcaggaagcgggcttcgaggccttcgtcgtcggc
ggcgccgtgcgcgacctgctgctgggcgtgaaaccgaaagacttcgacatcgccaccaac
gccacgccggaacaggtcaagcgtttgttccgccgcgccttcatcatcggcaagcgcttc
cagatcgtgcacgtgatgtttggccaggatttgctggaagtgacgaccttccgcggcgcc
ggtgccgactccgcgcccaaggatgaacatggccgcgtcctgcgcgacaacaccttcggc
ttgcagcacgaagacgcgctgcgccgcgacttcacgatcaacgccatgtattacaacccg
gccacgcaggaagtactcgactaccacggcggcgtggaagacatccgcgccaagaccttg
cgcatgatcggcaagccggaagaacgctaccgcgaagatcccgtgcgcatgctgcgcgtc
gtgcgcttcgccgccaagctgaaattcaccatcgagccgcatacggccgctccgattccc
gtcatggcgccgctgatcaacaacgtgcccgcgccgcgcgtgttcgacgaaatgctcaaa
ctcctgatgagcggccacgcgctggcttgcctgcagcagctgcgcaaggaaggcttgcat
cacggcctgctgccgctgctcgacgtggtgctggaacagccgctgggcgcgaaattcgtc
acgctggcgctggacgccacggaccagcgcatcgccgccggcaagaccgtctcgccaggc
ttcttgtttgcctcgctgctgtggcaccaggtactggaaaaatggacggcctaccgcgcc
gcaggcgaatcgacgattcccgcgctgcacctggcggccgacgacgtgctcgactcgcaa
acggaaaaactggccttgcagcgcaagatcggttccgacatgcgcgacatctggtcgatg
cagccgcgcttcgagcgccgcgtcggcaaggcgccgtacaaactgcttgagcacctgcgc
ttccgcgccggctacgacttcctgctgctgcgctgcgcctcgggcgagatcgacatggac
atcggcgaatggtggacagccttttatgaaggcgacgaggaaacgcgcgaagcgctgctt
gtcagcgccaatgccgcaccgggggccgtcaagaagaagcgcccgccacgccgcagcacg
cgcagcaagaccagcacgggcggaggttcgaccaccggcagcaccagcggcaaataa
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