Janthinobacterium aestuarii: OPV09_27325
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Entry
OPV09_27325 CDS
T11009
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
jae Janthinobacterium aestuarii
Pathway
jae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OPV09_27325 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jae03019
]
OPV09_27325 (recQ)
03400 DNA repair and recombination proteins [BR:
jae03400
]
OPV09_27325 (recQ)
Enzymes [BR:
jae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OPV09_27325 (recQ)
Messenger RNA biogenesis [BR:
jae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OPV09_27325 (recQ)
DNA repair and recombination proteins [BR:
jae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OPV09_27325 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
GARS_N
Motif
Other DBs
NCBI-ProteinID:
WWO46357
LinkDB
All DBs
Position
6067959..6069782
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AA seq
607 aa
AA seq
DB search
MNQDLNQRALHLLQTVFGYPAFRGQQADIVDHVSHGGDALVLMPTGGGKSLCYQIPALLR
DGVGVVVSPLIALMQDQVDALAEVGVRAAFLNSTQTYEEASRIERLVRTGGIDVVYVAPE
RLMTQRCLDLFQASKISLFAIDEAHCVAQWGHDFRPEYIKLSVLHEQFPDVPRIALTATA
DPQTRAEIALRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFINTEHAGDCGIVYC
LSRKKVEETAEFLNQSGIRALPYHAGMEYAKRSANQARFLREENIVMVATIAFGMGIDKP
DVRFVAHLDLPKSIEGYYQETGRAGRDGMAANAWMAYGLQDVVLQRRMIDESEADDTFKR
VLGVKLDAMLGLCETLSCRRMRLLEYFGEPASPCGNCDTCLVPPVSFDGTVPVQKLLSAI
YRVDQRFAGGHVIDVLRGVESERIKTWHHDSLSVFGIGSDLGEAEWKSILRQAIALGLVS
VDHEQYSSLKLTDASRPVLKGGQKVQLRQYQKPVKTSKRSTSVAKGYVETDLSASEQAIF
DKLRWWRVETARTHNVPAYVIFVDATLREIAKAKPTSLEQMRGVSGVGEKKLASYGDEIV
AMILEMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagatcttaaccagcgcgcgctgcacctgctgcaaaccgttttcggctacccg
gccttccgaggccagcaagccgacatcgtcgaccacgtcagccatggcggcgacgcgctg
gtactgatgcccacgggcggcggcaagtcgctgtgctatcagattcccgcgctgctgcgc
gatggcgtcggcgtcgtcgtctcgccgctgatcgcgctgatgcaggaccaggtggacgct
ttggccgaagtcggcgtgcgcgccgccttcctcaattccacgcaaacctacgaagaagcg
agccgcatcgagcgcctggtgcgcacgggcggcatcgatgtcgtctacgtggcgcccgag
cgcctgatgacgcagcgttgcctggacctgttccaggcgtcgaagatatccctgttcgcc
atcgacgaggcgcattgtgtggcccagtggggccacgacttccgtcccgaatacatcaag
ctgtcggtgctgcacgagcagttcccggacgtgccgcgcatcgcgctcaccgccacggcc
gacccgcagacacgtgccgaaatcgccttgcgtttgcagctggaagacgcgcgccagttc
gtctcgtccttcgaccgcccgaacatccgctaccagatcgtggaaaaggcgaatggccgc
aagcagctgctcgacttcatcaacacggaacacgcgggcgactgcggcatcgtgtactgc
ctgtcgcgcaaaaaagtcgaagagacggcggaatttctgaaccagagcggcatccgcgcc
ctgccgtatcacgctggcatggagtacgccaagcgcagcgccaaccaggcgcgcttcctg
cgcgaagaaaacatcgtcatggtcgccaccatcgccttcggcatgggcatcgacaagccc
gacgtgcgcttcgtggcccacctggatctgccgaaaagcatcgagggctattaccaggaa
acgggacgcgcgggccgcgacggcatggccgccaacgcctggatggcgtacggcttgcag
gacgtggtgctgcagcggcgcatgatcgacgagtccgaagcggacgacaccttcaagcgc
gtgctgggcgtcaaactcgacgccatgctgggcctgtgcgaaacgctcagctgccggcgc
atgcgattgctcgaatacttcggcgaaccggcttcgccgtgcggcaattgcgacacctgt
ttggtgccgcccgtatcgttcgacggcacggtgcccgtgcaaaaactgctgtcggccatc
taccgcgtcgaccagcgtttcgccggcggccacgtgatcgacgtgctacgcggcgtggaa
tcggaacgcatcaagacctggcaccacgattccttgtcggtgtttggcatcggctcggac
ctgggcgaagcggaatggaaatcgatcctgcgccaggccatcgcgctgggtctcgtctcg
gtcgaccatgaacaatacagctcgctgaaactgacggacgcctcgcgccccgtgctcaag
ggcggccagaaagtacagctgcgccagtaccagaaaccggtgaaaaccagcaagcgcagc
accagcgtggcgaagggctatgtcgagacggatctatcggcaagcgagcaggcgatcttc
gacaagctgcgctggtggcgcgtggagacggcgcgcacgcacaacgtgcccgcctatgtg
attttcgtcgacgccaccttgcgcgaaatcgccaaggccaagcccacttcgctggaacag
atgcgcggcgtgagcggcgtgggcgagaaaaaactggcctcgtacggcgacgaaatcgtc
gccatgattctggagatgatttga
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