Janthinobacterium agaricidamnosum: GJA_1406
Help
Entry
GJA_1406 CDS
T03157
Name
(GenBank) 3'-5' exonuclease family protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
jag
Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jag03016
]
GJA_1406
Enzymes [BR:
jag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GJA_1406
Transfer RNA biogenesis [BR:
jag03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GJA_1406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF3731
Motif
Other DBs
NCBI-ProteinID:
CDG82059
UniProt:
W0UZR0
LinkDB
All DBs
Position
complement(1553102..1553779)
Genome browser
AA seq
225 aa
AA seq
DB search
MPPYQGIQLDQVRLVKSGHDVQAALAALMAADAVGFDTESKPTFVKGETSTGPHLIQLST
DDTAYLFQVGPNPPSDVLKALKAILESPITLKVGFGLSDDVKRLRHKLGISPVQVLDLSV
ALRGGQRNDLGAKTAVAKFFGMRLQKSKKISTTNWATTRLSEKQILYAADDAQVALRVYR
RWLAEGGKVAPSKAQRVPATAPATAPATAPATAPATAAIIIADKP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ttgccgccctaccagggcatccaactggaccaggtcaggctggtcaaatccggccacgat
gtgcaagccgcgctggctgcgctgatggcggccgacgcggtcggcttcgataccgaatcg
aagccgacgttcgtcaagggcgaaacctcgaccggcccgcatctgatccagctgtccacc
gacgacaccgcctacctgttccaggtcggcccgaatccgccatccgatgtattgaaagcg
ctcaaggccatccttgagtcgcccatcacgctcaaggtcggcttcggcctgtccgacgac
gtcaagcgcttgcgccacaagcttggcatttcaccggtacaagtgctggacttgtcggtc
gcgctgcgcggcggccagcgcaacgatctgggcgccaagacagccgtcgccaagttcttc
ggcatgcgcttgcaaaaatcgaaaaaaatctcgaccaccaactgggccaccacccgtctc
agcgaaaagcaaatcctgtacgcggccgacgacgcccaagtggcgttgcgggtctaccgg
cgctggctggccgaaggcggcaaggtcgcgccgtccaaggcgcagcgcgtccctgccacg
gcacccgctacggcacccgctacggcgcccgctacggcacccgctacggccgccatcatc
atcgccgacaagccgtaa
DBGET
integrated database retrieval system
