Janthinobacterium agaricidamnosum: GJA_143
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Entry
GJA_143 CDS
T03157
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
jag
Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
GJA_143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
DUF1978
Motif
Other DBs
NCBI-ProteinID:
CDG80809
UniProt:
W0UWN4
LinkDB
All DBs
Position
174207..180527
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AA seq
2106 aa
AA seq
DB search
MKPFYYSKLLPDMAERTKYATVSRLAFSNPALRRYLLKQFTAPFGQSGSFLGDPVFEATF
GWEASTATMGDLAGNLLSSALVDAMDAPPDELRDDYRFPRSATPYVHQLQAWRLLASDLP
QSVVVTSGTGSGKTECFMVPILDRLCREQQAARRPLVGVRALFLYPLNALINSQRDRLHA
WTHAFGDSLRFCLYNGNTEHKVPQRERDQVPNQVLDRETLREVPPPILVTNATMLEYMLV
RAQDASILEKSKGTLEWIVLDEAHSYIGSQAAELALLLRRVLHGFGVDASKVRFVATSAT
IGDPSGEAGIKLRTFLADLAGVGVEQVHVVAGQRSVPVLPPADDRHRQSSLQTLQELAGE
TDSGERLFAALAGNDTAMKLRNRFAQPPDRKPVAQLSELCELLIPAAVDTSTKQTQSLLW
LDLLSGTTRVLPSGRLEPFLPLRAHLFHQVLAGLWACADSQCPCKANSLLDVPEWPFGKI
YMEQRKRCECGVPVFEINSCSECGESFLPAMLGLTEHGYFLEATDSDAVDEFSLDVEPSD
DEGGEDDVGVVVHVSRTKVIIANRILGATTGTRVDRLTLQVEPDDSVACLRLDIRDEEAQ
KDGRMALRCPCCNEVESAKSPLARRAILGSPFLLGQIIPTLLEFCEDGEQPLTKPYRGKR
MITFTDSRQGTARIAAKIQQDSERNRIRGLVLARVASLANGPENPVIRQKQEQISTLQSA
LVAGPNAGLENLIRTFEKEIVEASVFKPVGFNDMAEHLTTNEPDVKRMYEFYLGLDPELF
SGPHGLREFAKMLLAREFARRPRRVNSSETMGLVAVHYPKLEAIQAKPVLGGMSLEEWKS
FLKISLDFFVRENTCIDLPTSWMKWGGNKVPRKYLLGPQSKEKAGHPFLKWPQVSGARRD
PRLARLLAYGLKIDARTPDGRDAIDSLLRNAWDDLIGCGILQGSVSGGYYLTFDAIGFVP
ITRAWICPVTRRILDTTFRSITPYLPRDNPSPATAECYPITLPSYALLSQSFTSESERLE
AIRSWLMTAPEITTFREEGIWSDLSDRIVEGAAYFRAAEHSAQQPARRLGNYERDFKNGY
LNLLSCSTTMEMGVDIGGISVVAMNNVPPHPANYLQRAGRAGRRSETRSVALTVCKNNPH
DQSVFDNTRWPFDTSLPLPAISLSSSAIVQRHVNSMLLSNFLRVRAGTGGMDLNKLDCAW
FFLPHDAALVDQFCNWAENFLGKNNAALSKGLRSLIRNTCFDGTTALTGLTQIAAAEMLR
VRNAWYEEYASIDARISEFSSPAMQKEAACKALSIQRSRLASEYLLSELASEGFLPGYGF
PSHIASFDTLNIEEIKRNKQQAAHREDNRMRHRDLPSRDLVTALREYAPGSDVVMDGMVY
RSAGITLNWHAPAAQQQIREIQSIRTAWRCRSCGANGTEPNVDSTLHCAECAKPIPPDGI
RKYLEPAGFAVDLYADIHNDVTHQQFIKPQSPWIHVSAEWTSLPNARLGRFRASPEGAAY
FHSSGAHDLGYAVCLKCGRAEPMGDDSSATTSLKGHLPAIFRHPHKPLRGKRGGESAVCS
GSDEPWSIMPHLHLGHEVRTDVLELQLQTVDGDYLQDEAAAFSLAVAIRSAIADMLGIQS
DELGCSTKEVRADGGTICRSILVYDNNASGYVSTVSDRIDAVLRKAAHALHCPKSCDSAC
QHCLDNYDTRFQNELLNRHAALAFLTEAWIRDMQLPVEYAFFGAANSQAEYQPLAEAIWR
ELTAPTNTALYLYLHGDVTDWDLPASTLRSYLYRWIGVGKPITFVLSEAALQTISMPNRQ
MLNAWANLETVSIGTCKKSPLIGAGVLLAQIASLGGTISWAMTNELAGCVGPQWGASAGQ
TLVRGLGIEPASVKEVPVGELMPANQANSYQLQVTDQWNGSLQGFGERFWRDLFEAYPDL
ASPLSRGNNNVVGVSYRDRYLNAPLPVALLLEVINGLKRRYEDQWNPQQIVIETVSLSTT
SQIASAPRPVWMDWTNEALRQAAIEEAFAYCGMYEIEFSLIKKYDAEHARTLEIEFQDGS
GIVVRLDQGLSYWKANRKGSRVGGTHDRDNEFDFSLPTSLQGEKIAELRTEVVCPSYPTF
LYANLR
NT seq
6321 nt
NT seq
+upstream
nt +downstream
nt
atgaagccattttattattcgaaactattgcccgacatggcagagcgtactaaatacgca
acggtaagccgccttgccttcagcaatccagccttgcgcaggtatctgctgaaacaattt
actgcaccgttcggtcagtctggtagtttcctgggcgatcctgtcttcgaagcgacgttc
ggttgggaagcatccaccgcaaccatgggtgatttggctggcaacttactatcgtcggca
ctggttgacgctatggatgctccgcccgacgagttgcgtgacgattatcgcttccccaga
agcgcaacaccttacgtgcaccagctgcaagcatggcgtttgctggccagcgacttgccg
cagtcagtggtggtcaccagtggcactggttctggaaagacagaatgcttcatggttccg
attctcgatcgactgtgtcgtgagcagcaagccgctcggcgtccgctggtcggtgtgcgc
gcactgtttttatatccgcttaacgcgctgattaatagtcaacgcgaccgactgcatgcg
tggacccatgcctttggcgattcgctgcgcttttgcctatataacggcaataccgagcac
aaggtaccccaacgcgaacgtgaccaagtgccaaaccaagtgctcgaccgcgaaacgctc
agggaggtcccgcctccaatcctagtgaccaacgcaactatgctggagtacatgctagta
cgcgcccaagatgcgtcgattcttgagaaatctaagggtacgctcgaatggatcgtgttg
gatgaggcgcatagttacatcggttcgcaagcagcagagctggccctgctgttacggcgc
gtattgcacggctttggggtcgacgcgagtaaagttcgattcgtcgcaacttcggcaact
attggtgatccatctggcgaggcaggcattaagctacgcacttttctggctgatctggct
ggggtgggagttgagcaagtgcatgtagtggcggggcagcgatcggtgccagtgctgccg
ccggccgatgatcgtcaccggcagtcttctttgcaaactttgcaggaattagctggcgaa
acggacagtggggagcgcctgttcgccgcgctagccggcaacgatactgcaatgaaattg
cgcaataggtttgctcagccgccggatcgtaagcctgtggcgcagctatctgaactatgc
gaactcttaattccggcagcagtggacacgtcaacgaaacaaacacaaagcctgctgtgg
ctggacctgctgagcggcacaacacgagtcctgccatcgggacgactcgaaccatttctt
ccactgcgtgcgcacttgtttcaccaagtgcttgctggcctgtgggcgtgcgctgattca
cagtgtccctgcaaggcgaatagtctgctggatgttcccgaatggccgttcggtaagatc
tatatggagcagcgcaaacgctgcgagtgcggtgtgccggtgttcgaaatcaattcatgc
agcgagtgtggcgaaagctttttgccagctatgcttggcctcacagagcatggctacttt
ttagaagcaaccgatagtgatgccgtcgacgaattctctctcgatgttgagccgagcgac
gacgaaggcggagaagatgacgttggagtggttgtccatgttagccgaaccaaggtcatt
atcgcgaatcggatccttggtgccactactggaactagggtcgataggctaacgctgcaa
gtcgaaccggatgatagtgtggcctgcttgcgtctcgacatccgcgatgaagaggcacaa
aaggacggtcgcatggcgcttcgttgtccatgttgtaatgaagtcgaaagcgctaagtcg
ccgttggcacgccgcgccatattgggatcaccgtttttgctaggacagattattcctacg
ttactcgaattttgcgaggacggagaacaaccgcttactaagccttatcgcggtaagaga
atgatcacatttaccgacagccgacagggaaccgctcggattgctgcgaagatccagcag
gattctgagcggaatcggattcggggacttgtgttggctagggtcgctagcttggccaat
gggcctgagaaccctgtcatcaggcagaaacaggagcagatttcgacgctccagagtgcg
ctcgttgcaggcccgaatgcaggcttggaaaatctgatacgcacattcgaaaaggagatt
gtcgaggctagcgtctttaagcctgtgggcttcaacgatatggccgagcacctcactacc
aacgagccggacgttaagcgcatgtacgagttctacttgggcttggacccagagctgttt
agtggccctcacgggttacgcgaattcgcaaaaatgttactcgctcgagaatttgctcgc
cgtccgcggcgagtaaacagcagcgaaaccatgggactcgtggcggtacactaccccaaa
ttggaagcgatccaagcgaagccggttttgggaggcatgtcacttgaagagtggaagtcg
ttcttgaaaatctcactcgacttcttcgtgcgtgaaaacacctgcattgatttgccaacc
tcgtggatgaagtggggaggaaataaggtacctcgtaagtacctacttgggccacaatct
aaagaaaaggccggccatcctttcctgaaatggccgcaggtatctggagcccgccgggac
ccacgcttggcacggttgctggcatatggcttgaagatcgatgcacgcactccggacggt
cgcgatgcaattgattcgctgttacgaaatgcatgggacgacttgattggttgcggcatc
ttgcagggcagtgtgagtggcggctattacttgaccttcgatgccattgggttcgttcca
atcactcgtgcttggatttgtccagtaacacggcgtatattggacacaacatttcggagc
attacgccgtacttgccgcgcgacaatcctagtcccgccacggcggagtgttatccgatt
accctgccatcttatgccctgctatcgcagagttttacctcagaaagcgaacgcctggaa
gcaatccgatcttggctgatgacggcaccggagatcacgacctttcgagaggaaggcata
tggtctgatctaagcgaccgtatcgttgagggggcggcttatttccgggcagccgagcat
tccgcgcaacagccagcacgtcgcttggggaactacgagcgcgacttcaagaacggttat
ctaaacctactgagttgctcgaccaccatggaaatgggtgttgatattggtggcatttca
gtggtcgcgatgaataatgtgccaccgcacccggctaactatttacaacgagcaggtcgc
gccggccgccgcagcgaaactaggtcggtagcacttactgtttgcaagaataacccccat
gatcagtccgtattcgacaatacgcgttggccgtttgacactagtttgcccttgccagcc
atttcgttgtcgagtagcgcgatagtgcagcgtcacgtcaattcgatgctactttcaaat
tttctgcgtgttagagccggtacaggcggaatggacctgaacaaactcgattgtgcttgg
ttcttccttccgcacgatgcagcgctggtggatcagttttgcaactgggccgaaaatttc
ctgggaaagaataatgcggcactgtcaaagggcttgcgctcgctaattcgtaacacctgt
ttcgatggtactactgctctcaccggattaacgcagatcgctgcggccgagatgctgcgg
gtacgcaatgcatggtacgaagagtacgctagcatagacgcgcgaatttccgagttttcg
tcaccagcaatgcagaaggaggctgcatgcaaggccctcagcattcaacgtagtcgacta
gcttcggaatatcttttgtcggaactggcatcggaaggtttcctgccgggatatggattc
ccgtcccatattgcgtccttcgatacgcttaatatcgaggaaattaagcgcaataagcag
caggcagcacaccgagaagacaaccgtatgcgtcatcgcgatttgcccagccgcgacctt
gtcaccgcgctacgtgagtatgccccaggttccgacgtggtcatggatggtatggtttac
cggagtgctggtattacgctcaactggcatgcacctgcagcacagcagcagattcgcgaa
atccagagcatccgaactgcttggcggtgtcgatcatgtggtgcgaacggcacagagcca
aacgtcgattcaacccttcactgcgctgagtgcgcaaagcccatacctccagatggtatc
cgcaagtatcttgaaccggcagggtttgccgttgacctatatgcagacattcataacgat
gtgacgcatcaacagtttataaagccgcagtctccttggattcacgtctccgcagagtgg
acctcgttgccgaacgcgcggctcggacgtttccgtgcgagcccagagggggccgcctat
ttccattcgtctggtgcgcatgaccttggatatgcagtttgcctcaagtgtggcagggcc
gaacccatgggggacgacagttcggccacgacatctttaaaaggtcatttgcccgctatt
tttcgccatccacataagcctttgcgaggtaagcgcggtggtgaaagtgcagtttgctca
ggcagtgatgagccgtggtcgattatgccgcacctacacttgggacacgaggtgcgtact
gatgtacttgagctgcagcttcaaactgtagacggcgattacctgcaagacgaagcagcg
gctttctccttggcggttgcgattcgctcggcgattgcagacatgctgggaattcaatct
gatgaactgggatgtagtactaaggaagtgcgcgcagatggcgggaccatttgccgttct
attttggtctacgacaataatgcaagtgggtatgtgagtaccgtcagcgaccgcatcgat
gctgtgttgcgcaaggccgcgcatgctctgcactgccccaagtcatgcgacagcgcgtgc
cagcattgcctggataattacgacacccgtttccagaacgagttattaaatcggcacgcg
gcgctggctttccttaccgaagcttggatccgtgacatgcagctgccagttgagtatgcg
ttttttggagcagcgaatagtcaggctgaataccagccgttagcggaagcaatttggcgt
gaactaacagctccaactaataccgcgctgtatctttacttgcacggtgatgttacagac
tgggacctgccggcgtcgactctgcgaagctacctataccgctggattggtgttggtaag
ccgattacctttgtgctttcagaggcggctctgcaaacgatctcaatgccaaaccgtcaa
atgctcaatgcgtgggcaaaccttgagacagtgagtattggaacctgcaagaagagccca
ttaattggggcgggtgttttgctggcgcagatcgctagtttaggtggaactatatcttgg
gcgatgacgaatgaattggcggggtgtgtcggtcctcagtggggagcaagcgcggggcaa
actttggtacgggggcttggaattgaacctgcatctgttaaagaggttccggtgggagaa
ctgatgcctgccaaccaagcgaacagctatcaactccaggtcacagatcaatggaacgga
agtctacagggttttggtgaacgcttctggcgcgacctgttcgaagcttacccagatctg
gcatcgccattaagtcggggaaataataacgttgtcggagtatcgtatcgcgatcgttat
cttaatgcgcccctgccggttgcattgctgcttgaagtcatcaatggtttgaagcggcgt
tatgaggatcagtggaatccgcagcagattgtaatcgaaacagtctcactaagtaccaca
tcccagattgcgtcggcaccacgacccgtctggatggattggaccaatgaggcacttcgc
caagcagctattgaggaagcattcgcctattgtggcatgtatgaaatcgagttttcgctg
ataaaaaaatatgatgccgagcacgcgaggactctggaaatcgaattccaagatggatcg
ggaatcgtagttaggctggaccaagggctgtcctattggaaggcaaatcgaaaggggtca
cgcgtcggtggcacacacgacagagacaacgagttcgatttttcgctgcctacatcactg
caaggagagaaaatcgcggagcttcgtactgaagtcgtttgcccaagctacccgacattc
ttatatgcaaatctacgttaa
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