Janthinobacterium agaricidamnosum: GJA_1568
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Entry
GJA_1568 CDS
T03157
Symbol
sbcD
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
jag
Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jag03400
]
GJA_1568 (sbcD)
DNA repair and recombination proteins [BR:
jag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJA_1568 (sbcD)
Archaeal homologous recombinant proteins
GJA_1568 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Oxidored_q6
Motif
Other DBs
NCBI-ProteinID:
CDG82212
UniProt:
W0V4L2
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All DBs
Position
complement(1726119..1727339)
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AA seq
406 aa
AA seq
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MRLLHTSDWHLGQTLHNFERGHEHQCFLDWLLDTIVAEQADALLVAGDVFDNANPSSASQ
KQLYTFLQQARARAPHLNLIVIAGNHDSPGRLEAPGPLLAAHGTHVIGQVQRDTDGKIDV
ERMVLPLTGKTGAVEAWCIAVPFLRPGDVPRVAPDNGADPYLAGIALLYSQALEAAQARR
QPGQAIVAMGHCHMIGGDMSNDSERRIVIGGTEMLPSGVFGPAIAYAALGHLHKAQMVAR
QEHIRYCGSPIPLSFAEVGYQHQVLRIDLDGAAVTSVTPLPVPRAVPLLRIPAQPAPVDE
VLARLLALDLPEAVPEALPLLEVRVRLDAPEPGLRARIEAALDGKPVRLAKIETSSAARS
DQPQAMTLDQLDQLQPDDIFRKLYLQKFGNDAPAEQLSAFAELMLK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgcacacttccgactggcatcttggccagacgctgcacaatttcgagcgc
ggccacgaacaccagtgctttctcgactggctgctcgacaccatcgtggccgaacaggcc
gatgcgttgctggtggccggcgacgtgttcgataacgccaatccgtcatcggcttcgcaa
aagcagctgtataccttcttgcagcaagcgcgggcccgcgcgccgcatttgaacctgatc
gtcatcgccggcaaccacgattcgcccggccggctggaagcgcccggcccgctgctggcg
gcgcacggcacccatgtcatcggccaggtgcagcgcgataccgatgggaagatcgatgtc
gaacgcatggtgctgccgctgaccggcaagaccggcgcggtcgaggcgtggtgcatcgcg
gtccccttcctgcggcccggcgacgtgccgcgcgtggcccccgacaatggcgccgatccc
tacctggccggcatcgcgctgctgtacagccaggcgctggaagcggcgcaagccaggcgc
cagccgggccaggccatcgtcgcgatgggccattgccatatgatcggcggcgacatgtcc
aacgattcggaacgccgcatcgtcatcggcggcaccgaaatgctgccgtccggggtattc
ggtccagccatcgcctatgccgcgctgggccacttgcacaaggcgcaaatggttgccaga
caggagcacatccgctattgcggcagcccgataccgctgtcgttcgccgaagtcggctac
cagcaccaggtcctgcgcatcgacctcgacggcgcggccgtgacctcggtgacgccgctg
ccggtgccgcgcgcggtgccattgctgcgcataccggcccagccggcgcctgtcgacgag
gtactggcccggttgctcgcgctggatttgccggaagccgtgccggaagcgctgccgctg
ctggaagtgcgggtgcggctggatgcgccggaaccgggcttgcgcgcccgcatagaagcg
gcgctggacggcaagccggtgcggctggcgaagatcgaaacatcgagcgcggcacgcagc
gatcaaccgcaagcgatgacgctggaccagctcgaccagctgcagccggacgatatcttc
cgcaagctgtacctgcaaaaattcggcaatgacgcgccggccgaacaactgagcgcattc
gcggaactgatgctgaaatga
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