Janthinobacterium agaricidamnosum: GJA_1980
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Entry
GJA_1980 CDS
T03157
Name
(GenBank) beta-eliminating lyase family protein
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
jag
Janthinobacterium agaricidamnosum
Pathway
jag00250
Alanine, aspartate and glutamate metabolism
jag00410
beta-Alanine metabolism
jag00430
Taurine and hypotaurine metabolism
jag00650
Butanoate metabolism
jag01100
Metabolic pathways
jag01110
Biosynthesis of secondary metabolites
jag01120
Microbial metabolism in diverse environments
jag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
GJA_1980
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GJA_1980
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GJA_1980
00430 Taurine and hypotaurine metabolism
GJA_1980
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GJA_1980
Enzymes [BR:
jag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
GJA_1980
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Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CDG82616
UniProt:
W0V410
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All DBs
Position
complement(2165826..2167427)
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AA seq
533 aa
AA seq
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MTDTRMDQLLQQHFSIDTLKQAPAPLHKALRMLGGWLAAQRSQPYPSTPHAELLPQFTEI
DPPAGGMPVADFLDLLDSKVLTHTAQLNHPMYIGHMTQALPWVSVLAEAFTAALNQNQVK
IETAYVSTLIEKQLIGWLHRQVYRRGDAEYAASMRDTGHALGNVVNGGTMGNLTALAVAL
EHQLPGTRKQGLFATMTQSGYRGLAVIGSARSHYSLKKSLATLGLGEAALHLVPVGRDNR
IDIAALQEKIAELKQAQIKIVAMVGIAGTTETGAIDPLAAMAEIAEREQIWFHVDAAWGG
ALLLAEQFRPLYDGIARADSVVIDGHKLLWVPMAQSMVLFKDRNSLNQLKHNANYILRSN
SGDLGQTSLEGSRRFDALKLWTSFKIFGVDGYTALLQQAATLTGQMRELLADQQDFELMT
DSDTFILTYRYIPQQWREQLAGLLAHGNMEAALLLNQKVNELNAKLQNRQKAQGTSFVSR
TVLESTAYPGQTTVLRVVLSNVRTRPRHLRAILAEQRQLGTLLLAEPGKQLNT
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacagataccaggatggaccagctgctgcaacagcacttttcaatcgatacgctgaag
caagcaccggcgccgctgcacaaggcgctgcggatgctgggcggctggctggccgcgcaa
cgcagccagccctacccgtccacgccgcacgccgaattgctgccgcagttcaccgagatc
gatccgccggccggcggcatgccggtggcggacttcctcgatttgctcgacagcaaggta
ctgacccacacggcgcaactgaatcacccgatgtacatcggccacatgacccaggccttg
ccgtgggtcagcgtactggccgaagcgtttacggcggcgctgaaccagaaccaggtcaag
atcgaaacggcgtatgtctcgacgctgatcgaaaaacaactgatcggctggctgcaccgc
caggtgtaccggcgcggcgacgccgagtatgccgcgtcgatgcgcgacaccggccacgcg
ctgggcaacgtcgtcaatggcggcaccatgggcaacctgacggcgctggcggtggcgctg
gaacatcaattgccgggcacccgcaagcagggtttgtttgccacgatgacacagtcgggc
taccgcggcctggccgtgatcggctcggcgcgcagtcattattccttgaaaaaatcgctg
gccacgctgggcctgggcgaagccgcgctgcacctggtgccggtcggccgcgataatcgc
atcgacatcgccgcgctgcaagaaaagatcgccgaactgaaacaggcgcagatcaagatc
gtcgccatggtcggcatcgccggcaccaccgaaaccggcgccatcgacccgctggcggcc
atggccgagattgccgagcgcgaacagatctggttccacgtcgatgccgcctggggcggt
gcgctgttgctggccgaacagttccggccgctgtatgacggcatcgcacgggccgattcg
gtggtcatcgacggccacaagctgctgtgggtgccgatggcgcaaagcatggtgctgttc
aaggatcgcaacagcctgaaccagctgaagcacaacgccaactacatcttgcgcagcaat
tcaggcgacctgggccaaacctcgctggaaggttcgcgccgtttcgacgcattaaaactg
tggacctcgttcaagatcttcggcgtcgacggctatacggcgctgctgcaacaggcggcc
acgctgaccggccagatgcgcgagttgctggccgaccagcaagacttcgagttgatgacc
gattcggacacttttatcctgacctatcgttatattccgcaacagtggcgcgaacaactg
gctggcttgttggcacacggcaacatggaagcggcgctgctgctgaaccagaaagtcaat
gaattgaacgcgaagctgcaaaaccgccaaaaggcgcaagggaccagttttgtatcgcgc
acggtgctggagtcgaccgcctatccgggccagaccacggtattgcgcgtggtgctgagc
aacgtcaggacccggccgcggcatttgcgggccatcctggccgaacagcgccagctgggc
acgctactgctggccgaaccaggcaagcaactcaacacctaa
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