Janthinobacterium agaricidamnosum: GJA_2052
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Entry
GJA_2052 CDS
T03157
Symbol
metC
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
jag
Janthinobacterium agaricidamnosum
Pathway
jag00260
Glycine, serine and threonine metabolism
jag00270
Cysteine and methionine metabolism
jag00450
Selenocompound metabolism
jag00670
One carbon pool by folate
jag01100
Metabolic pathways
jag01110
Biosynthesis of secondary metabolites
jag01230
Biosynthesis of amino acids
Module
jag_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GJA_2052 (metC)
00270 Cysteine and methionine metabolism
GJA_2052 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GJA_2052 (metC)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GJA_2052 (metC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jag04147
]
GJA_2052 (metC)
Enzymes [BR:
jag01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
GJA_2052 (metC)
Exosome [BR:
jag04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GJA_2052 (metC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Mesd
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CDG82687
UniProt:
W0V5Z3
LinkDB
All DBs
Position
complement(2235444..2236625)
Genome browser
AA seq
393 aa
AA seq
DB search
MSEQTNRKSHLATRVIHAGQSPDPSTGAIMPPIYATSTFVQESPGVHKGLDYGRSHNPTR
WALERCVADLEGGSQAFAFASGLAAISTVLELLEPGAHILAGDDMYGGTYRLFERVRRRS
AGLDFTYVDLTNPENLLAAIRPETRMIWVETPTNPMLKLADLQAIARICRERGIIAVADN
TFASPLVQRPLEHGFDIVVHSTTKYLNGHSDIIGGIAIVGAEERQEKWREQLGFLQNSVG
AIAGPFDSFLALRGVKTLAIRMERHCKSALALALWLETQPEVKKVYYPGLASHPQHDLAK
RQMDGFGGIISIDLHTDLAGARRFLERCEVFALAESLGGVESLIEHPALMTHATIPPEQR
ARLGIGDGLVRLSVGIEDLEDLRHDLRQALDAI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaacaaaccaaccgcaagagccacctcgccacccgcgtgatccacgccggccaa
agtcccgatccgtcgaccggcgcgatcatgccgccgatctacgcgacgtccacctttgtc
caggaaagccctggcgtgcacaagggtctcgattacggccgttcgcataatccgacccgc
tgggcgctggaacgctgcgtggccgacctggaaggcggcagccaggcgttcgccttcgcc
tccggactggccgcgatctcgacggtgctggaattgctggaaccgggcgcgcacatcctg
gccggcgacgatatgtacggcggcacctaccgcctgttcgagcgcgtgcgccgccgcagc
gccggcctcgattttacctatgtcgacctgaccaatccggaaaacctgctggccgcgatc
cgccctgaaacacggatgatctgggtcgaaacgccgaccaacccgatgctgaaactggcc
gacttgcaggcgatcgccaggatttgccgcgagcgcggcatcatcgcggtggccgacaac
accttcgccagcccgctggtgcagcgtccgctggaacacggtttcgacatcgtggtgcac
tcgaccaccaagtacctgaacggccactccgacatcatcggcggcatcgccatcgtcggc
gccgaggagcgccaggaaaaatggcgcgaacaactgggcttcctgcaaaattcggtcggc
gccatcgccggtccgttcgacagcttccttgcgctgcgcggcgtgaaaacgctggcgatc
cgcatggaacgccattgcaagagcgcgctggcgctggccttgtggctggaaacccagccg
gaagtcaagaaagtgtattacccgggcctggcgtcgcatccgcagcatgacttggcgaaa
cggcagatggacggtttcggcggcatcatttcgatcgacttgcataccgacctggccggg
gcgcggcgcttcctggagcgttgcgaagtgttcgcgctggcggaaagcctgggcggcgtc
gaaagcctgatcgaacatccggcgctgatgacccacgccaccatcccgccggaacagcgg
gccaggctgggcatcggcgacggcctggtgcggctgtcggtcggcatcgaagacctggaa
gacttgcgccacgacttgcgccaggcgctggacgcgatttaa
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