Janthinobacterium agaricidamnosum: GJA_2443
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Entry
GJA_2443 CDS
T03157
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
jag
Janthinobacterium agaricidamnosum
Pathway
jag03030
DNA replication
jag03430
Mismatch repair
jag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJA_2443 (holB)
03430 Mismatch repair
GJA_2443 (holB)
03440 Homologous recombination
GJA_2443 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jag03032
]
GJA_2443 (holB)
03400 DNA repair and recombination proteins [BR:
jag03400
]
GJA_2443 (holB)
Enzymes [BR:
jag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJA_2443 (holB)
DNA replication proteins [BR:
jag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJA_2443 (holB)
DNA repair and recombination proteins [BR:
jag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJA_2443 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
AAA
YAcAr
RNA_helicase
nSTAND6
ResIII
TniB
Motif
Other DBs
NCBI-ProteinID:
CDG83074
UniProt:
W0V2M6
LinkDB
All DBs
Position
2686693..2687730
Genome browser
AA seq
345 aa
AA seq
DB search
MSSSLYPWQEAAWTQLQQLRQRMPHAILFHGAAGIGKSGFIEHFAQSLLCEAVRPDGHAC
GACASCGWFSQHNHPDYRRVRPEALEDEAPADGEEGEADGARKTAKSTKAPSKDIKIEQI
RNLADFMNISTHRQGLRVVVLYPAEALNTPASNALLKTLEEPPPGTLFLLASNSLDRLLP
TILSRCRKFALPMPSHEQALAWLKGQGLNDADSWLREQGGAPLAALAQSETGSRDDTEAL
LQLLAHPSVEGALKIADKLQKAPLAPLVACLQRWLYDVFSYKLAGNIRYYPRYRRELDSL
AGKIHIGRLMAALKSVNDRRAIADHPLSPKLFIEDMLLDYAACCA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttcactttatccatggcaggaagccgcctggacgcaattgcagcaattgcgc
caacgcatgccgcatgcgatcctgttccatggcgcggccggcatcggcaagtcgggcttc
atcgagcactttgcccagtcgctgctgtgcgaagccgtgcggccggacggccatgcctgc
ggcgcttgtgcatcgtgcggctggttttcgcagcacaaccatcccgactaccgccgcgtg
cggccggaagcgctggaagacgaagcgccggccgatggcgaagagggcgaagcggatggc
gcgaggaaaaccgccaagtcgaccaaggcgccgtcgaaagacatcaagatcgagcaaatc
cgcaacctggcggacttcatgaatatttcgacccaccgccagggcttgcgcgtggtggtg
ctgtatccggccgaggcgctgaatacgccggcctcgaacgccttgctgaaaacgctggaa
gagccgccgccgggcaccttgttcttgctggcgtcgaacagcctggatcgtttgttgccg
accatcttgtcgcgctgcaggaaattcgccttgccgatgcccagccatgaacaggcgctg
gcctggctcaagggacagggcttgaacgacgccgacagctggctgcgcgagcagggcggt
gcgccgctggcggcgctggcccagtccgagaccggcagccgcgacgatactgaagcgttg
ctgcaattattggcgcatccaagcgttgaaggcgcgttgaaaattgccgacaaattgcag
aaagcaccgctggcgcccttggttgcctgcttgcagcgctggctttatgatgtcttttcg
tacaaactggcaggaaacatccgttactatccgcgttatcggcgtgaactggacagcttg
gccggcaagatccatatcggccggctgatggccgcgctcaagagcgtcaacgaccggcgc
gcgatcgccgaccatccgctgtcgccgaagctgttcattgaagacatgctgctcgattac
gccgcatgctgcgcctga
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