KEGG   Janthinobacterium agaricidamnosum: GJA_2552
Entry
GJA_2552          CDS       T03157                                 
Symbol
clpV
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
jag  Janthinobacterium agaricidamnosum
Pathway
jag03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:jag00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GJA_2552 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:jag02044]
    GJA_2552 (clpV)
Secretion system [BR:jag02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   GJA_2552 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 Clp_N ClpB_D2-small AAA_22 AAA_16 nSTAND3 AAA_29 NBD_SMAX1 AAA_7 Sigma54_activat ResIII Zeta_toxin T2SSE TniB SLFN-g3_helicase NACHT nSTAND6 DUF815 SRP54 ABC_tran_CTD
Other DBs
NCBI-ProteinID: CDG83183
UniProt: W0V755
LinkDB
Position
complement(2821141..2823804)
AA seq 887 aa
MSINLKTLISKLNDTSRIAATRAASICVGLGQYEVDLEHLFLALLEQPNSDFVVIARKSG
ISVSMLEADLQAEVARLQTGNARTPVFSARLPKLFEHAWLIASLDLQAGRQASIRSAHLL
QALLTEPELAQLAYRGSKLFNKFNLDDLKHKLDKISDGSQEAVALADGAAELEQGSDPVG
ELAGKAAASKTPALDQFTTNLTQRARDGKVDPVIGRDMEIRQAIDILMRRRQNNPILTGE
AGVGKTAVVEGLALRIALDDVPDVLKGVEIHTLDMGLLQAGASVKGEFENRLKNVIDEVK
KSPHAIILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAATTWGEYKKYFEKDA
ALARRFQVVKIEEPSEELACAMLRGMAPLMEKHFNVRVYDEAITEAVRLSHRYIMGRQLP
DKAISVLDTACAKVALGQSATPALIENLAKKLERIDAEAAALEREESSGASHPARLKDLR
AARSAAAAEHTALAARWETEKALTEHIKAARLALESGEGAKPDASQGKDLQALLSDLREL
QGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKDEIRTVLKLKDMLEERVLGQSHAIDAV
AQRVRTARANLDDPNKPKGVFLFVGPSGVGKTETALALADVLYGGERKLITINMSEYQEA
HSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLELFFQVFDKGVLD
DAEGREIDFKNTIIILTSNVGSGTLMQACLNVAPADLPTVEQLEEKIRPQLVKAFKPAFL
GRLKVIPFYPISDDVLVRIIGLKLRKIAQRIALNHKAEFSHDDALVEAVLARCTEVDSGA
RNVDNILNGTLLPEIAESVLARMAEGAAIGKIKVSASKQGQFKYTIR
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgagcatcaatctgaagacactgatcagcaagctgaacgataccagccgcatcgccgcg
acccgcgcggccagcatctgcgtcggtctcggccaatatgaagtcgacctggagcacttg
ttcctggccttgctggaacagccgaacagcgattttgtcgtgatcgcccgtaagagcggc
atcagcgtcagcatgctggaagccgacttgcaggccgaagtggcgcggctgcaaaccggc
aatgcgcgcacgccggtattttcggcccgcctgccgaagctgttcgagcacgcctggctg
atcgcctcgctcgacttgcaggccggacgccaggccagcattcgcagcgcgcacttgctg
caagcgctgctgaccgagccggaactggcgcaactggcctaccgcggttcgaaactgttc
aacaagttcaacctcgacgatttaaaacataagctggacaagatcagcgacgggtcgcag
gaagcggtggcgctggccgatggcgctgccgaactggagcagggcagcgacccggtcggc
gaactggctggcaaggcggccgcgtcgaaaaccccggcgctggaccagttcaccaccaat
ctgacgcagcgcgcgcgcgacggcaaggtcgacccggtgatcgggcgcgacatggaaatc
cgccaggccatcgatatcctgatgcgccggcgccagaataatccgatcctgaccggcgag
gccggcgtcggcaagaccgcggtggtcgagggcctggcgctgcgcatcgcgctggacgac
gtgccggacgtcttgaagggcgtcgaaatccatacgctcgacatgggcttgctgcaagcg
ggcgccagcgtcaagggcgagtttgaaaaccgccttaaaaacgtcatcgacgaagtcaag
aaaagcccgcacgcgatcatcctgttcatcgacgaagcccacaccatgataggcgccggc
ggcacggccggccagaacgatgccgccaacctgctgaaaccggcgctggcgcgcggcgaa
ttgcgcaccatcgccgccaccacctggggcgaatacaagaaatactttgaaaaagacgcg
gcactggcgcgccgcttccaggtcgtcaagattgaagagccgagcgaagaactggcttgc
gccatgttgcgcggcatggcgccgctgatggaaaaacacttcaatgtgcgggtctacgac
gaagccatcaccgaggcggtgcggctgtcgcaccgctacatcatgggccgccagctaccg
gacaaggccatcagcgtgctcgacaccgcctgcgcgaaagtcgcgctgggacaaagcgcg
accccggcgctgattgaaaacctggccaagaaactggagcgcatcgacgccgaggcggcc
gcgctggaacgcgaagaaagtagcggcgccagccacccggcccgcctgaaggacttgcgc
gcggcgcgcagcgcggccgcggccgaacacacggcgctggcggcgcgctgggaaaccgaa
aaagcgctgaccgaacacatcaaggcggcccggctggcgctcgaaagcggcgagggcgct
aaaccggacgccagccagggcaaggacttgcaggcgctgctgtccgacttgcgcgaattg
caaggcgaaacgccgatggtgccggtgcaggtcgacggccacgtggtggcggaaatcgtc
gccggctggaccggcatcccgctcggcaaaatggtcaaggatgaaatccgcaccgtgctg
aagctgaaggacatgctggaagagcgcgtgctgggccagtcgcatgcgatcgacgcggtg
gcgcagcgggtgcgcaccgcgcgcgccaacctggacgacccgaacaaaccgaaaggcgtg
ttcctgttcgtcggcccgtccggcgtcggcaagaccgaaaccgcactggcgctggccgac
gtgctgtacggcggcgaacgcaagctgatcacgattaatatgagcgaatatcaggaagcg
cacagcgtgtccggcctgaagggttcgccgccgggctacgtcggttacggcgaaggcggc
gtgctgaccgaggcggtgcggcgcaacccgtacagcgtggtgctgctcgatgaagtcgaa
aaagcccatccggacgtgctcgaactgttcttccaggtattcgacaagggcgtgctggac
gacgcggaagggcgcgagatcgacttcaagaacacgattatcatcctgacctcgaacgtc
ggatcgggcacgctgatgcaagcgtgcctgaacgtggcgccggccgacttgccgacggtg
gagcaactggaagaaaaaatccgtccgcaactggtcaaggcattcaagccggccttcctg
ggacgcttgaaagtgatcccgttctacccgatttcggacgacgtgctggtcaggatcatc
ggcttgaaactgcgcaagatcgcgcagcgcatcgcgctcaaccacaaggccgagttcagc
cacgatgacgcgctggtggaggcggtactggcgcgctgcaccgaagtcgattccggcgcg
cgcaacgtcgacaatatcctgaacggcaccttgctgcccgaaatcgccgaatcggtgctg
gccaggatggccgaaggcgcggcgatcggcaagatcaaggtcagcgccagcaagcagggg
cagttcaagtatacgatcaggtaa

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