Janthinobacterium agaricidamnosum: GJA_3471
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Entry
GJA_3471 CDS
T03157
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
jag
Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jag03009
]
GJA_3471 (rumA)
Enzymes [BR:
jag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GJA_3471 (rumA)
Ribosome biogenesis [BR:
jag03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GJA_3471 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
MTS
RrnaAD
Methyltransf_32
TRAM
Methyltransf_15
Methyltrans_SAM
Methyltransf_11
Methyltransf_23
PDGF
UPF0020
Cons_hypoth95
PCMT
Motif
Other DBs
NCBI-ProteinID:
CDG84087
UniProt:
W0V9Z8
LinkDB
All DBs
Position
complement(3779081..3780421)
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AA seq
446 aa
AA seq
DB search
MQENIIEIESLDMDARGVGHLHNEDDTPGKVVFVEGALPGERVSFVTFKKKKNWEAARMT
ALHRESSMRVKPKCVHFDNCGGCSMQHLEPTAQVAIKQRVLEDNLWHIGKVRPLTVMRPM
YGPTWGYRYRARLSVRHVKKKDAVLVGFHEKKSAFVADMDSCEILPPHVSAMLLPLRALI
ASLSIFEQMPQIELAVGEDVTAMVLRIMAPLTADDETKLKAFADQWGVQWWLQVKGPETA
VPFYPLDKQLHYLLPEFGVKMPFKPVDFTQVNHHINRVLVSKALRLLEVQPEDRVADLFC
GLGNFTLPLATQGSEVVGIEGSTTLTERALENAKANGLSAKTSFSTRNLFEVTTEDLIAL
GKFDRMLIDPPRDGAMALCQALAGLRQVRPEMLPKRIVYVSCSPSTLARDAGILALEAGY
ILNKAGVVNMFPHTSHVESMAVFDLA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaatatcatcgaaatcgaatcgctcgacatggacgcccgcggcgtcggccat
ttgcacaatgaagacgacacgccgggcaaggtggtgttcgtcgaaggggcgttgccgggc
gagcgcgtcagctttgtcactttcaagaaaaagaaaaactgggaagcggcgcgcatgacc
gcgctgcaccgcgaatcgtcgatgcgggtcaaaccgaaatgcgtgcatttcgataactgc
ggcggctgttcgatgcagcacctggagccaactgcccaggtcgccatcaagcagcgcgtg
ctggaagataacctgtggcacatcggcaaggtgcggccgttgaccgtgatgcggccgatg
tacggcccgacctggggctaccgttaccgggcacgcctgtcggtgcgccacgtcaagaaa
aaagatgcggtgctggtcggtttccatgaaaaaaaatcggccttcgtggccgacatggat
agctgcgaaatcttgccgccgcacgtatcggcgatgctgttgccgctgcgcgcgctgatc
gcttcgctgtcgattttcgagcaaatgccgcaaatcgaactggcggtcggcgaagacgtc
accgcgatggtgctgcgcatcatggcgccgctgacggccgacgatgaaaccaaattgaag
gcgtttgccgaccaatggggtgtgcaatggtggttgcaggtcaaggggccggaaaccgcc
gtgccgttttatccgctggataagcaattgcactatttgttgccggaattcggcgtcaag
atgccgttcaagccggtcgattttacccaggtcaaccaccacatcaaccgggtgctggta
tcgaaggcgctgcgcctgctggaagtgcagcccgaagaccgggtggccgacttgttctgt
ggcctgggcaactttaccttgccgctggcgacgcagggcagtgaagtggttggcattgag
ggtagtaccactctgaccgaacgggcgctggaaaatgccaaggccaatggtttgtcggcc
aagacctcgttctcgacgcgcaatctgtttgaagtgacgaccgaggatttgatcgcgctg
ggcaagttcgaccgcatgctgatcgacccgccgcgcgatggcgcgatggccctgtgccag
gcgctggccggcttgcgccaggtgcgccccgagatgctgccgaagcgcatcgtctacgtg
tcgtgcagcccgtcgacgctggcgcgcgacgccggtattttagcgctggaagcgggatat
atcctcaataaggcgggtgtcgtcaacatgttcccgcacacttcccacgttgaatcgatg
gcggtatttgatctggcttaa
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