Janthinobacterium agaricidamnosum: GJA_35
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Entry
GJA_35 CDS
T03157
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
jag
Janthinobacterium agaricidamnosum
Pathway
jag00550
Peptidoglycan biosynthesis
jag01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GJA_35 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
jag01002
]
GJA_35 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jag01011
]
GJA_35 (dacB)
Enzymes [BR:
jag01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GJA_35 (dacB)
Peptidases and inhibitors [BR:
jag01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
GJA_35 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
jag01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GJA_35 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
CDG80703
UniProt:
W0V044
LinkDB
All DBs
Position
complement(37662..39146)
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AA seq
494 aa
AA seq
DB search
MFRPVLFAALLGVVSSVHAQLPEPVSRLLRAAAIPEQAISVVVLRGDTTLLSHGAQQSMQ
PASTMKMVTTAVGLEQLGPIFRGRTEFRTSADVIDGVLKGDLILHGGADADFNDDALNHM
LQNLRKQGIRKIQGDLVLDRQLFQPARPDLGVPPFDETPEWRYNVIPDALLLNTNMLTID
LNSTDGKLTLAMMPELDNVSVTSDMKLINASCATWEDGWRTPETVRGANGKLQVILHGTF
PRNCIRSTSINALDRQDYADRLFRSNWKRLGGSFSGIVREAPPTGQPPVATPVGSRLLAD
HVARALPEVLRDINKNSDNTLARTLFLSLGSLESDGWLGSRPVALAAPEDTVSRARQVVH
DWFQRHHIDDQGLIIENGSGLSRTERISAGQMAALMQAASIGPWAPEFLSSLPIVALDGT
MRRRLIGTPAAARARIKTGTLKNVSAIAGYVPDANNQQCVVVAIINHDLVGNGNGRAVLD
ALIEWVAASGVAQQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtcccgtcctgttcgccgccttgctcggtgttgtttccagcgttcacgcccaa
ttaccggaaccggtcagccgcttgctgcgcgccgccgctattccggaacaggccatcagt
gtggtcgtgttgcgcggcgataccacgctgctgtcgcatggcgcgcagcaaagcatgcag
ccggcctcgacgatgaaaatggtgaccaccgcggtcggcctcgaacaactgggaccgatc
tttcgcggccgcaccgaatttcgcaccagcgccgatgtcatcgacggcgtgctgaaaggc
gacctgatcctgcacggcggcgccgatgccgatttcaacgacgatgcgctgaaccacatg
ctgcaaaacctgcgcaagcagggcatccgcaagatccagggcgacctggtcctcgaccgc
caattgttccagccggcccggccggacctgggagtgccgccgttcgatgaaacgccggaa
tggcgctacaacgtgatccccgacgccttgctgctcaacaccaatatgttgaccatcgat
ctgaactcgaccgatgggaaactgacgctggcgatgatgccggaactggacaatgtcagc
gtgacgtccgacatgaaactgatcaatgccagttgcgcaacatgggaagacggctggcgc
acgccggaaaccgtgcgcggcgccaacggcaagttgcaagtgatactgcacggcaccttc
ccgcgcaattgcatccgctcgaccagcatcaatgcgctcgaccgccaggattacgccgac
cgcctgttccgcagcaactggaaacgcctgggcggcagcttcagcggcatcgtgcgcgaa
gcgccgcctaccggacagccgccggtggcgacgccggtcggcagccgcttgctggccgac
catgtggcgcgcgccttgccggaagtgctgcgtgatatcaacaagaattccgacaacacg
ctggcgcgcacgctgttcctgagcctcggcagcctggaaagcgatggctggctgggcagc
cgcccggtggcgctggccgcgccggaagacaccgtcagccgtgcgcgccaggtggtgcat
gactggttccagcgccaccatatcgacgaccagggcttgatcatcgaaaacggttccggc
ttgtcgcgcaccgagcgcatcagcgccggccagatggcggcgctgatgcaggccgccagt
atcggcccatgggcgcccgagttcctgtccagcttgcctatcgtcgcgctggacggcacc
atgcgccgccgcctgatcggcacgccagccgccgcgcgcgcgcgcatcaagaccggcacg
ctgaaaaacgtcagcgccatcgccggctacgtgccggacgccaacaaccagcaatgcgtg
gtggtggcgatcatcaaccacgacctggtcggtaacggcaatggccgcgccgtgctggac
gccttgatcgagtgggtggcggcgtcgggtgtagcacagcaataa
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