Janthinobacterium agaricidamnosum: GJA_3612
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Entry
GJA_3612 CDS
T03157
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
jag
Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jag03016
]
GJA_3612 (truA)
Enzymes [BR:
jag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GJA_3612 (truA)
Transfer RNA biogenesis [BR:
jag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GJA_3612 (truA)
Prokaryotic type
GJA_3612 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CDG84227
UniProt:
W0VAD1
LinkDB
All DBs
Position
complement(3929790..3930587)
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AA seq
265 aa
AA seq
DB search
MKRIALGVQYDGTAWHGYQKQEDGQTVQDQLEDALEKFARVRLGTTCAGRTDTGVHALEQ
VVHFDTDLQRDIHSWVRGVNTFLPPSIVVRWAHEVPADPDDQFHARFSARSRAYHYVLYN
NPTRSPLLEGRAGWVFRPLDIGPMQEAVKPLIGWHDFTAFRASQCQAKSPVKLMHEIRIE
RRGDLIVFTIRANAFLHHMVRNLVGSLIYIGLGKHPPQWLGEVLAGRDRGEAAPTFMPDG
LYLAKIDYDPKWGLPQETGSALPWF
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacggatcgcattaggtgtccagtacgacggtacggcgtggcatggttaccaaaag
caagaagatggccagacggtgcaagaccagctggaagacgcgctagagaaattcgcccgg
gtccggctgggcaccacctgcgccggacgcaccgataccggcgtgcatgcgctggagcaa
gtggtgcatttcgataccgacttgcagcgcgacatacattcctgggtgcgcggcgtgaat
accttcttgccgccttccattgtggtgcgctgggcgcatgaagtgccggccgacccggac
gaccagttccacgcccgtttcagcgcccgctcgcgcgcctatcattatgtgctctacaac
aatccgacccgctcgccgctgctggaagggcgcgccggctgggtgttccgtccgctggac
atcggaccgatgcaagaagcggtcaagccgctgatcggctggcacgactttaccgccttc
cgcgcgtcgcaatgccaggccaagtcgccagtcaagctgatgcacgaaattcgcatcgaa
cggcgcggcgacttgatcgtgttcacgatacgcgccaacgccttcctgcatcatatggta
cgcaacctggtcggttcgctgatttatatcggcctcggcaagcatccgccgcaatggctg
ggcgaagtgctggccgggcgcgaccggggcgaagcggcgccgaccttcatgccggatggc
ctgtacctggcgaaaatcgattacgacccgaaatggggcttgccgcaggaaaccggcagc
gccttgccgtggttttaa
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integrated database retrieval system
