KEGG   Janthinobacterium agaricidamnosum: GJA_3810
Entry
GJA_3810          CDS       T03157                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
jag  Janthinobacterium agaricidamnosum
Pathway
jag00740  Riboflavin metabolism
jag01100  Metabolic pathways
jag01110  Biosynthesis of secondary metabolites
jag01240  Biosynthesis of cofactors
jag02024  Quorum sensing
Module
jag_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:jag00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    GJA_3810 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GJA_3810 (ribD)
Enzymes [BR:jag01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     GJA_3810 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     GJA_3810 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: CDG84424
UniProt: W0V6G5
LinkDB
Position
complement(4128108..4129178)
AA seq 356 aa
MRLALEWAHQGLYTTSPNPRIGAVIVKDGLVIGAGVTQPAGQNHAEIQALADARARGFDV
RGATAYVTLEPCNHFGRTPPCSQALVRAGLGRVVAAMLDPNPLVAGQGMATLEAAGIATS
TGLLADEAYELNIGFFSRMQRGKPWVRLKAAASLDGISALHNGQSQWITGPAARADGHAW
RARTCAILTGIGTVKADDPQLTVRAVDTPRQPRRIVVDSRLDISPSARILQGGGTWIVAA
VADPEKEAALRAVGADIILLPNASGKVDLPQLMLELGRRQINELHVEAGSKLNGSLIREG
CVDELLVYLAPSLIGDGQGMFALPALSALDGKYPLKFHEVKQIGEDLRILARFTTL
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcgcctggcgctggaatgggcgcatcaaggcttgtatacgacgtcgccgaatccgcgt
atcggcgccgtgattgtcaaggacggcctggtgatcggcgccggcgtgacccagccagcc
gggcaaaaccatgccgaaatccaggcgctggccgacgccagggcgcgtggtttcgatgtg
cgcggcgccaccgcgtatgtgacgctggaaccgtgcaaccactttggccgcacgccgccg
tgttcacaagccctggtacgcgccggcctgggccgggtggtcgccgcgatgctggatccg
aatccgctggtcgccgggcagggcatggccacgctggaagcggcgggcatcgccacgtcc
accggcttgctggccgatgaggcatatgaattgaatatcggctttttttcgcgcatgcag
cgcggcaaaccgtgggtgcgcctgaaagcggcggccagcctggatggcatcagcgccttg
cacaatggacaaagccagtggatcaccggtcccgcagcgcgcgccgacggtcacgcgtgg
cgcgcccgcacgtgcgcgatcctgaccggcatcggcaccgtcaaggccgacgatccgcaa
ttgacggtgcgcgcggtcgacacgccgcgccagccgcgccgcatcgtggtcgacagccgg
cttgatatcagcccgtcggcccgcatcttgcagggcggcggcacctggatcgtcgccgcc
gtcgccgatcctgaaaaggaagccgcgctgcgcgcagtgggcgccgacatcatcctgttg
ccgaacgcctctggcaaggtcgatttgccgcaactgatgctggaactggggcggcgccag
atcaatgaattgcacgtcgaagccggttccaaattgaacggttcgctgatacgcgaaggt
tgcgtcgatgaattgctggtctacctggcgccatcgctgatcggcgacgggcaaggcatg
ttcgcgctgcctgcgctcagtgcactggacggcaagtatccattgaaatttcatgaggtt
aagcaaatcggtgaagatttgcgtatccttgccagattcactactttataa

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