Janthinobacterium agaricidamnosum: GJA_4290
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Entry
GJA_4290 CDS
T03157
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jag
Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jag03016
]
GJA_4290 (truB)
Enzymes [BR:
jag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GJA_4290 (truB)
Transfer RNA biogenesis [BR:
jag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GJA_4290 (truB)
Prokaryotic type
GJA_4290 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CDG84898
UniProt:
W0VC18
LinkDB
All DBs
Position
complement(4628605..4629546)
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AA seq
313 aa
AA seq
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MAGLTRPPGIKRVRDLVDGVLLLDKPVGWSSNDALIKVKRVLNAKKAGHTGTLDPFATGL
LPLCFGEATKFSQDLLEADKTYETVVHLGVSTDTGDTEGAVLATREVDVTREQIYAVLER
FRGDIMQVPPMYSALKRDGKPLYEYARAGITLEREARPVTIHQLEFISYEAPFLTLSVMC
SKGTYIRVLGEDIGAALGCGAHLNALRRTKVGTLTIAGVITLDALTAHAEPLGLLEPVDA
LLSSFPAILLDDALAKRFLHGQRIALGKENVAVPDDPGRVRVYHGPRLLGTGQLQEYAIL
APERLIATAHPPN
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtggccggcttgacaagaccgcccggcatcaagcgggtgcgtgacctggtcgatggcgta
ttgctgctcgataagcctgtcggctggtcgagcaatgacgcgctgatcaaggtcaagcgc
gtgctgaacgcgaaaaaggcgggccataccggcacgctggatccgttcgcgaccggcctg
ctgccgctgtgctttggcgaagcgaccaagttttcccaggatttgctggaagccgacaag
acgtacgagaccgtggtgcacctcggcgtgagcaccgataccggcgataccgaaggcgcg
gtgcttgccacgcgcgaagtggatgtgacgcgcgaacagatctatgctgtactggaacgt
tttcgtggcgacatcatgcaagtgccgccgatgtattcggcgctcaagcgcgacggcaag
ccgctgtatgaatatgcgcgcgccggcatcacgctggaacgcgaagcgcgcccggtaacg
atacaccagctggaattcatcagttatgaagcgccgttcctgacgttgtcggtcatgtgc
agcaagggtacttatatccgcgtgctgggcgaggacatcggcgcggcgctgggttgcggc
gcgcacctgaatgcgctgcgccgcaccaaggtcggtacgctgacgatagccggcgtgatc
acgctcgacgcgctgaccgcccacgccgaaccgctgggcctgttggagccggtcgacgcc
ttgctgtcgagtttcccggccatcctgctggatgatgcattggcgaaacgtttcctgcac
ggccagcgcatcgcgctgggcaaggaaaacgtggccgtgcccgacgatccgggccgggtg
cgggtgtatcacggcccgcgtttgctgggcaccggccagctacaggaatatgccatcctg
gcgccggaacggttgatcgccacggcgcatccaccgaattaa
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