Janthinobacterium agaricidamnosum: GJA_435
Help
Entry
GJA_435 CDS
T03157
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
jag
Janthinobacterium agaricidamnosum
Pathway
jag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJA_435 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jag03019
]
GJA_435 (recQ)
03400 DNA repair and recombination proteins [BR:
jag03400
]
GJA_435 (recQ)
Enzymes [BR:
jag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJA_435 (recQ)
Messenger RNA biogenesis [BR:
jag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GJA_435 (recQ)
DNA repair and recombination proteins [BR:
jag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GJA_435 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF5843
GARS_N
Motif
Other DBs
NCBI-ProteinID:
CDG81095
UniProt:
W0V0H4
LinkDB
All DBs
Position
complement(510675..512510)
Genome browser
AA seq
611 aa
AA seq
DB search
MTFQAEQDLNQRALHVLQTVFGYPAFRGQQADIVDHVSHGGDALVLMPTGGGKSLCYQIP
ALLRDGVGVVVSPLIALMQDQVDALAEVGVRAAFLNSTQTYEESSRIERLVRTGQIDVVY
VAPERLMTQRCLDLFQASKIALFAIDEAHCVSQWGHDFRPEYIKLSVLHEQFPDVPRIAL
TATADPQTRAEIAMRLQLADARQFVSSFDRPNIRYQIVEKGNGRKQLLDFITTEHEGDCG
IVYCLSRKKVEETAEFLNQSGIRALPYHAGMEYAKRSANQARFLREENIVMVATIAFGMG
IDKPDVRFVAHLDLPKSIEGYYQETGRAGRDGLAANAWMAYGLQDVVLQRRMIDESEADE
TFKRVLGVKLDAMLGLCETLSCRRMRLLEYFGEPATPCGNCDTCLMPPVSFDGTVPVQKL
LSAIYRVDQRFAGGHVIDVLRGVESERIKTWHHDALSVFGCGNDRSELEWKAILRQAIAL
GLVSVDHEQYSSLKLTDAARPVLKGGQKVQLRQYQKPVKTSKRTSTAAKGYVETDLSASE
QAIFDKLRWWRVETARAHNVPAYVIFVDATLREIAKAKPTSLEHLRGVTGVGEKKLASYG
EEIVAMIIELT
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcaagcagagcaggacctgaaccagcgcgcgctgcacgtattgcaaaccgtg
ttcggctacccggcctttcgcggccagcaagccgatatcgtcgaccatgtcagccatggc
ggcgacgcgctggtgctgatgccgaccggcggcggcaagtcgctgtgctaccagatcccg
gcgctgctgcgcgacggcgtcggcgtggtggtgtcaccgctgatcgcgctgatgcaagac
caggtcgacgcgctggccgaggtgggcgtgcgcgccgccttcctgaactcgacccagact
tacgaagaatcgagccgcatcgagcggctggtgcgcaccggccagatcgacgtcgtgtat
gtggcgccggaacgcctgatgacgcagcgctgcctggacctgttccaggcgtcgaagatc
gcgctgttcgcgatcgacgaggcgcattgcgtgtcgcaatggggacatgacttccgcccc
gaatacatcaagctgtcggtgctgcacgagcaattcccggacgtgccgcgcatcgcgctg
accgccaccgccgacccgcaaacccgcgccgaaatcgcgatgcggctgcaactggccgat
gcgcgccagttcgtgtcgtcgttcgaccgccccaacatccgctaccagatcgtcgaaaag
ggcaacggccgcaagcagctgctcgacttcatcacgaccgaacacgaaggcgattgcggc
atcgtgtattgcctgtcgcgcaaaaaagtcgaggaaaccgccgaattcctgaaccagagc
ggcatccgcgcgctgccctatcacgccggcatggaatacgcgaagcgcagcgccaaccag
gcccgcttcctgcgcgaagaaaacatcgtcatggtcgccaccatcgccttcggcatgggc
atcgacaagcccgacgtgcgcttcgtggcccacctggacctgccgaaaagtatcgagggc
tattaccaggaaaccggccgcgccggccgcgacggactggccgccaatgcatggatggcc
tacggcttgcaggacgtggtgctgcagcggcgcatgatcgacgaatcggaagccgacgaa
acctttaaacgcgtgctgggcgtcaagctcgacgcgatgctgggcctgtgcgaaaccctc
agctgccggcgcatgcgcctgctcgaatatttcggcgaaccggccacgccgtgcggcaat
tgcgacacttgcctgatgccgccggtgtcgttcgacggcacggtgccggtgcaaaaactg
ctgtcggcgatttaccgggtcgaccagcgtttcgccggcggccacgtgatcgacgtgctg
cgcggcgtcgaatcggaacgcatcaagacctggcaccacgatgccctgtcggtattcggc
tgcggcaacgaccgcagcgaactggaatggaaagccatcttgcgccaggccatcgcgctg
ggcctggtcagcgtcgaccatgaacaatacagttcgctgaaattgaccgatgcggcgcgc
ccggtgctcaagggcggccagaaagtgcagctgcgccagtaccagaaaccggtcaagacc
agcaagcgcacctcgaccgccgccaagggctatgtcgaaaccgacctgtcggccagcgaa
caggcgatcttcgacaagctgcgctggtggcgcgtcgaaaccgcgcgcgcccacaacgtg
ccggcgtatgtgatctttgtcgatgcgacgctgcgcgaaatcgccaaggccaagcccact
tcgctggaacacttgcgcggcgtgaccggcgtcggcgagaaaaaactggcgtcgtatggc
gaggaaatcgtcgcgatgatcatcgagctgacctga
DBGET
integrated database retrieval system
