Janthinobacterium agaricidamnosum: GJA_4503
Help
Entry
GJA_4503 CDS
T03157
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
jag
Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jag03021
]
GJA_4503 (rpoH)
Transcription machinery [BR:
jag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GJA_4503 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
CDG85110
UniProt:
W0VBV5
LinkDB
All DBs
Position
4871624..4872514
Genome browser
AA seq
296 aa
AA seq
DB search
MSAPSALVPTKSNALGLGFTGNLGNLDAYISAVNRLPMLTHDEEVSLATRLREKNDLAAA
QELVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGVRLVSYAMHWVK
AEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKQGLDAMTPTQIDALAKLLDVKREEVIE
METRLSGRDIALESPTDDEDDKFSPIAYLSSEQSEPTKVLEAEQVTRLQSEGLETALGKL
DVRSRRIVEARWLANDDGSGATLHTLANEFGVSAERIRQIETAALKKMKGALAAYI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccgtccgcattggttccgaccaaaagtaatgcgctgggcttgggattcacc
ggcaacctggggaatctcgacgcctatatctcggctgtgaatcgtttacctatgctgacc
catgacgaagaagtttccctggcgactcgcctgcgtgaaaagaacgacctggccgccgcg
caagaactggtgctgtcgcacttgcgcctggtggtgtcgatcgcccgcggttacctcggt
tatggcttgccacacgccgacctgatccaggaaggcaatatcggcttgatgaaagccgtg
aaacgtttcgatcctgaccaaggcgtgcgcctggtatcgtacgcgatgcactgggtcaag
gccgagatgcatgaatacatcttgaagaactggcgcctggtcaaagtagcgaccaccaag
gcacagcgcaagctgttcttcaacctgcgcagccacaagcaaggcctggacgcgatgacg
ccaacccagatcgatgcgctggccaagttgctggacgttaagcgcgaagaagtgatcgag
atggaaacccgtttgagcggccgcgacattgcactggaatcgccgaccgacgatgaagac
gacaagttttcgccgatcgcctacctgtcgtcggaacaaagcgagccgaccaaggtattg
gaagcggaacaagtgacgcgtttgcaatcggaaggcctggaaacggcgctgggcaaactc
gatgtgcgttcgcgccgcatcgtcgaagcccgctggctggccaacgacgacggctccggc
gccaccttgcacacgctggccaacgagttcggcgtctcggccgagcgcatccgccagatt
gaaacggcggcgctgaaaaaaatgaagggtgcgctggctgcctatatttaa
DBGET
integrated database retrieval system
