Janthinobacterium agaricidamnosum: GJA_4557
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Entry
GJA_4557 CDS
T03157
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
jag
Janthinobacterium agaricidamnosum
Pathway
jag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GJA_4557 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jag03400
]
GJA_4557 (xseB)
Enzymes [BR:
jag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GJA_4557 (xseB)
DNA repair and recombination proteins [BR:
jag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GJA_4557 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_coatGP8
Motif
Other DBs
NCBI-ProteinID:
CDG85164
UniProt:
W0V8L1
LinkDB
All DBs
Position
complement(4920975..4921232)
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AA seq
85 aa
AA seq
DB search
MSKKLIPAAAAPASFEEAMAELAQLVTQMEAGQLPLEASVAAYQRGSELVKYCAAQLDTV
EAQVKVLEGDMLKPFSEGNGGEAGA
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaattaatacctgcagccgcagcgcctgcctcgtttgaagaagcgatggcg
gagttggcgcaactggtgacgcaaatggaagcggggcaattgccgctggaagcgtcggtc
gcggcttaccagcgcggttcggaattggtgaaatattgcgcggcgcaactcgataccgtc
gaggcgcaagtgaaagtgctggaaggcgatatgctaaaaccgttttctgaaggtaatggc
ggcgaggccggcgcatga
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