Janthinobacterium agaricidamnosum: GJA_4569
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Entry
GJA_4569 CDS
T03157
Name
(GenBank) uvrD/REP helicase family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jag
Janthinobacterium agaricidamnosum
Pathway
jag03420
Nucleotide excision repair
jag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GJA_4569
03430 Mismatch repair
GJA_4569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jag03400
]
GJA_4569
Enzymes [BR:
jag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJA_4569
DNA repair and recombination proteins [BR:
jag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GJA_4569
MMR (mismatch excision repair)
Other MMR factors
GJA_4569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CDG85176
UniProt:
W0VBB7
LinkDB
All DBs
Position
complement(4932993..4935299)
Genome browser
AA seq
768 aa
AA seq
DB search
MQNLLHNLNTEQYAAVTLPAQHALILAGAGSGKTRVLTTRIAWLIQTNQVSSAGILAVTF
TNKAAKEMLTRLSAMLPINTRGMWIGTFHGLCNRLLRTHHRDAALPQTFQILDSQDQLSV
IKRLLKANNIDDEKFPAKTVMYFINNAKDQGLRATAVEAYDAHERKLVELYQLYDDQCQR
EGVVDFAELLLRTFELLSRNQPLREHYQARFRHILVDEFQDTNNLQYNWLKLLAGHESRD
GGALFAVGDDDQSIYAFRGANVGNMSSFEHEFKVQNLIKLEQNYRSHGHILDSANMLISN
NSKRLGKNLRTDAGHGELVRVYEASSDLQEAQWIIEESKSLIAEGASRSEIAILYRSNAQ
SRVIEHALFSAGIPYHVYGGQRYFQRAEVKHAIAYLQLMDNPHNDSAFLRVVNFPTRGIG
ARSIEQLQAASEQYGISLYAAVPYVAGKAGSSLNSFVKLIEGVRFETQQLTLPEMVRVVL
EASTLLQHYQHEKEGADRIENLEQMVNAATQFVSEEGFGQGSPAYMGPASQAQAGAALVN
QDGIEIFDADAPLPVIMSPLSAFLSHASLEAGDNQAQAGQEALQMMTVHSAKGLEFDNVF
ITGLEEGLFPHESSSKEEGGVEEERRLMYVAITRARRRLYMSFSQTRMLHGQTRYNMKSR
FFDELPDESLKWLSPKVQANWFGNKKSAWDDAPLHSAGSDNAIAQKIALKSSGPGWRIGE
SVVHAKFGEGVIVNIEGSGGNARAQINFGHHGMKVLDLGIAKLERLGR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcttcttcacaaccttaataccgaacaatacgccgccgtcacgctgccggcc
cagcatgcgctgatcctggcgggcgccggttccggcaagacccgcgtgctgaccacccgc
atcgcgtggctgatccagaccaaccaggtgtcgtcggccggcatcctggccgtgacgttt
accaacaaagcggcgaaggaaatgctgacgcgcttgtccgcgatgctgccgattaatacg
cgcggcatgtggatcggcaccttccacgggctgtgtaaccgtttgctgcgcacgcatcac
cgcgacgccgcgttgccgcaaaccttccagattctggattcgcaggatcagttgtcggtg
attaagcgcttgttgaaagcaaataatatcgacgatgaaaaattcccggccaagaccgtg
atgtatttcatcaataacgccaaggaccagggcttgcgcgcgaccgccgtcgaagcctac
gatgcgcatgaacgcaaactggtcgagctgtatcagctatatgacgaccagtgccagcgc
gaaggcgtggtcgatttcgccgaactgttgttgcgcacctttgaattgctgagccgtaac
cagccgctgcgcgaacattaccaggcgcgtttccgccacatcctggtcgacgagttccag
gataccaataatctgcaatacaactggctgaaattgctggccggccatgaaagccgcgat
ggcggcgccttgttcgccgtcggcgacgacgaccagagcatctatgccttccgtggcgcc
aacgtcggcaacatgagttccttcgagcatgagttcaaggtacagaatttgatcaagctg
gagcaaaattaccgctcgcatggccatatcctcgatagcgccaacatgctgatttcgaat
aacagcaagcgcctcggcaagaatttgcgtaccgacgccgggcacggcgaactggtgcgt
gtctatgaagccagttccgacctgcaagaagcgcaatggatcatcgaagagtcgaagagc
ctgatcgccgaaggcgcgtcgcgcagcgaaatcgcgatcctgtaccgctcgaacgcgcaa
tcgcgggtgatcgagcatgcactgttttcggccggcattccgtatcacgtgtatggcggc
cagcgctacttccagcgcgccgaggtcaagcacgcgattgcgtatttgcaattgatggat
aacccgcacaacgattccgctttcttgcgcgtggtgaatttcccgacccggggcatcggc
gcccgctcgatcgagcaattgcaggcggcgtccgagcaatacggtatatcgctgtacgcg
gcggtgccgtatgtggccggcaaggcggggtcgtcgctgaacagcttcgtcaaattgatc
gaaggcgtgcgttttgaaacgcagcagctgaccttgccggaaatggtgcgggtagtgctg
gaagccagtaccttgctgcagcattaccagcacgaaaaagaaggcgccgaccgcatcgaa
aacttggagcaaatggtcaacgcggcgacccagttcgtgtccgaagaaggttttggtcaa
ggttcgccggcgtatatgggaccggccagccaggcgcaagccggcgcggcgctggtgaac
caggacggcatcgaaatcttcgacgccgatgcgccattgccggtcatcatgtcgcccctg
tccgccttcttgtcgcatgcgtcgctcgaagcgggcgacaaccaggcccaggcggggcaa
gaggccttgcaaatgatgacggtgcactcggccaagggcctggaattcgacaacgtcttt
attaccgggctggaagaaggcttgttcccgcacgaaagcagctccaaggaagagggcggc
gtcgaagaagagcggcgcctgatgtatgtggcgatcacgcgggcgcgccggcgcctgtac
atgagcttctcgcaaacccgcatgttgcacggccaaacccgctataacatgaagtcgcgc
tttttcgatgaattgccggatgagtcgctgaagtggctgtcgccgaaagtacaggcgaac
tggttcggcaacaagaaatccgcgtgggacgatgcgcccttgcacagcgccggttccgac
aatgcgattgcgcaaaagatcgcgctcaagtccagcggtccgggctggcgcatcggcgaa
tcggtggtccacgccaagttcggcgaaggcgtgatcgttaatatcgaagggagcggcggc
aatgcccgggcgcaaattaactttggccaccacggcatgaaagtgctggatttggggatt
gccaagctggagcggctggggcgctga
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