Janthinobacterium agaricidamnosum: GJA_4648
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Entry
GJA_4648 CDS
T03157
Symbol
rlpA
Name
(GenBank) rare lipoA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
jag
Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jag01011
]
GJA_4648 (rlpA)
Enzymes [BR:
jag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GJA_4648 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
jag01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GJA_4648 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
CDG85255
UniProt:
W0VC71
LinkDB
All DBs
Position
complement(5016488..5017606)
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AA seq
372 aa
AA seq
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MRRLVTPAVTPTRLSRGAVLLALLALAGCGTVQQQGTRPAAPSGVKTPPRQDPSLPVLPP
AGSGRGGYYKDDGPGDNPPPNLADVPDAEVRNDPPLPRANRPYTVLGKTYTPITDLQPFS
QRGTGTWYGKKFHGQRTSSGELYDMYKMTAAHPTLPIPSYARITSIDSGKQVIVRINDRG
PFHASRVIDVSYTAALKLGLLAKGSHEVLVERLLPDDIDRIVAARGQPQRQLTPSVQVVV
PPPEPVPVLKSPPPPVADQPPATPQTGAVLQPETTLVPVAASSAGAPAAAAPAAAVAGGF
YLQLGAYSQSNNADAARARLLPHAERLGSLDVVQSGGVYRVFGGPFASRADALQAAQGLP
DGLSLRAIVIQR
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggcttgttactccggctgtcactccaacgcgcctgtcgcgcggcgcggtcttg
ctggccttgctggcgctggccggttgcggcaccgtgcagcagcaaggcaccaggccggcg
gcaccgtccggcgtcaagaccccgccgcgccaggatccgtcgctgccggtgctgccgccg
gccggttccggccgcggcggttattacaaggatgacggcccgggcgacaatccgccgccg
aacctggccgacgtgccggacgccgaggtgcgcaacgatccgccgctgccgcgcgccaac
cggccgtataccgtactgggcaagacttacacgccgatcaccgacctgcagccgttttcg
cagcgcggcaccggtacctggtatggcaagaaatttcatggccagcgcacctcgtcgggc
gaactgtacgatatgtacaagatgaccgccgcccatccgaccttgccgattccgtcctat
gcgcgtattaccagcatcgacagcggcaagcaggtgatcgtgcggattaacgaccgcggc
ccgttccacgccagccgggtgatcgacgtgtcgtacacggcggcgctgaaactgggcttg
ctggccaagggcagccatgaagtgctggtcgagcgcctgctgccggatgatatcgaccgc
atcgtcgccgcgcgcggccagccgcagcgccagttgacgccatcggtgcaggtcgtggtg
ccgccgccggagccggtgccggtgctgaagtcgccgccgccgccagtggctgatcagccg
ccggccacgccgcaaaccggcgcagtgctgcaaccggaaaccacgctggtgccggtggcg
gccagctcggccggcgctcccgctgctgctgcgccggccgccgccgtggccggcggtttt
tatttgcagttgggcgcgtattcccagtccaataatgccgacgcggcgcgtgcgcggctg
ttgccgcacgccgaacggctgggcagcctggacgtggtgcagagcggcggcgtgtatcgc
gtgttcggcggcccgttcgccagccgcgccgacgccttgcaggcggcgcaggggttgccg
gatggattaagtttacgcgccatcgtgattcagcgttaa
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