Janthinobacterium agaricidamnosum: GJA_5112
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Entry
GJA_5112 CDS
T03157
Name
(GenBank) bacterial regulatory helix-turn-helix , lysR family protein
KO
K19338
LysR family transcriptional regulator, nitrogen assimilation regulatory protein
Organism
jag
Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jag03000
]
GJA_5112
Transcription factors [BR:
jag03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GJA_5112
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CDG85710
UniProt:
W0VDG5
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All DBs
Position
5484599..5485567
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AA seq
322 aa
AA seq
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MELRQLRYFVAIADHGSLSRAALVLHVAQPALTQQLRQLEQELGVQLLHRSAQGVLSTDA
GKVFYEHAQAILKQVADAKSAVVQSAARPSGSVILGLPHSISNALALPLLMAARLHYPEI
TLQLTEELTGNLNEQLKSGRVNLAVLFDDGQLTPFAASALIEEEMRFICRSDSAFAPARD
GVSLRQALATTLILPGLQHGVRPHIDRVAREAGLTPAAVIEINSIAILKSAILADMGATI
LPAAPLLGEIERGAMSSHAIHSPALSRTVVLCASKNIPLTNAAAAVSRLVRQVSHQLCRD
GNWPGTRVLGDQTSHAIPDAPS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgccaactccgttattttgtcgccatcgccgatcacggttcgctgtcgcgc
gcggcgctggtgctgcacgtggcgcaaccggcgctgacccagcaattgcgccagctggag
caggaactgggggtgcaattgctgcaccgctcggcgcagggcgtgctcagcaccgacgcc
ggcaaggtcttttacgagcacgcccaggcgatcctgaagcaggtggccgacgccaaatcg
gcggtggtccagtcggcggccaggccgtccggcagcgtcatattgggcttgccgcacagt
atctcgaatgcgctggccttgccgctgctgatggcggcgcggctgcactatccggaaatc
accttgcaactgaccgaggaattgaccggcaacctgaacgagcaattaaagtcgggcaga
gtgaacctggcggtgctgttcgacgatgggcagttgacgccgttcgccgccagcgcgctg
atcgaggaagaaatgcgcttcatttgccgcagcgattcggcgtttgcgccggcccgggat
ggcgtcagcctgcgccaggcgctggccaccacgctgatcctgccgggcctgcagcacggc
gtgcggccgcatatcgaccgcgtcgcgcgcgaagccggcctgacgccggcggcggtgatt
gaaatcaactcgatcgcgatcctgaaatcggcgatcctggccgacatgggcgccaccatc
ttgccggccgcgccgctgctgggcgaaatcgaacgcggcgcgatgtccagccatgcgatc
cacagcccggcgttgtcgcgcacggtggtgttatgcgcgtccaagaacatcccgctgacc
aatgccgcggcggcggtcagccggctggtgcggcaagtcagccaccaactatgccgcgac
ggcaactggccagggacgcgggtgctgggagaccagacatcgcatgcaatccctgacgcg
ccgtcttga
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