Janthinobacterium agaricidamnosum: GJA_5121
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Entry
GJA_5121 CDS
T03157
Name
(GenBank) bacterial regulatory helix-turn-helix s, AraC family protein
KO
K18991
AraC family transcriptional regulator, activator of mtrCDE
Organism
jag
Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jag03000
]
GJA_5121
Transcription factors [BR:
jag03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GJA_5121
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_6
HTH_18
HTH_AraC
HTH_23
Cupin_2
Cupin_3
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
CDG85718
UniProt:
W0VE76
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Position
5494152..5495117
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AA seq
321 aa
AA seq
DB search
MDTLSRLLSLYTMRTALDVRCHFGAPWLLDHDAVAPGIAPYHLVVEGRAWLDAGGKKGLA
LQAGDIIVFPHGDAHRLFTGDTGNVSPPRPLDGQHVLQAVGNDGAGPATGLLCGQFEFDR
HAATGLLKALPEVMLVRTAERPDFTGLHTLMTMLRLETDTPRPGAAAVVAQLSSALFALL
MRAWLEQAPAQPGWFAALAEPRLQPALHGMLAAPQQAWTLEQLAAACFMSRATFARVFRQ
VAGTTPAALLMQLRMAQAAAWLRQEKRPVAEIGERVGYQSEAAFNRVFKRVFGIGPGQYR
RHAYQPVAGTPIADTIADTQG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggataccctcagccgcctgttatcgctgtacactatgcgcaccgcgctggatgtgcgc
tgccacttcggcgcgccatggctgctcgaccatgacgccgtcgcgcccggcattgcgccg
tatcacctggtcgtcgaaggtcgcgcatggctcgatgccggcggaaaaaaaggcctggcc
ttgcaggccggcgacatcattgtgtttccgcatggcgacgcgcaccgcttgtttaccggc
gataccggaaacgtatcgccgccgcgtccgctggacggccagcatgtgctgcaagcggtc
ggcaacgatggcgccgggcccgctaccggcttgctgtgcggccagttcgaattcgatcgc
cacgccgcgacgggcttgctcaaagcgttgccggaagtaatgctggtgcgcaccgccgaa
cggcccgattttaccgggctgcacacgctgatgaccatgctgcggctggaaaccgacacg
ccgcgccccggcgccgccgccgtggtggcgcaactgtcgtcggcgctgttcgccttgctg
atgcgggcctggctggaacaggcgccggcccagccgggctggttcgcggcgctggccgaa
ccgcgcttgcagccggcgctgcacggcatgctggcggcgccgcagcaggcctggacgctg
gagcaattggcggccgcctgtttcatgtcgcgcgccaccttcgccagggtgttccggcaa
gtggccggcaccacgccggccgcgctgctgatgcaattgcgcatggcccaggccgcggca
tggctgcgccaggaaaaacgccccgtggccgagatcggcgaacgggtcggttatcaatcg
gaagcggcgttcaaccgcgtcttcaagcgtgtattcggcatcgggcccggccagtaccgg
cgccatgcctatcagccggttgccggcacgccaattgccgatacaattgccgatactcaa
ggatga
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