Janthinobacterium agaricidamnosum: GJA_5132
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Entry
GJA_5132 CDS
T03157
Name
(GenBank) bacterial regulatory helix-turn-helix , lysR family protein
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
jag
Janthinobacterium agaricidamnosum
Module
jag_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jag03000
]
GJA_5132
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
jag01504
]
GJA_5132
Transcription factors [BR:
jag03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GJA_5132
Antimicrobial resistance genes [BR:
jag01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
GJA_5132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
cIII
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CDG85730
UniProt:
W0VDI0
LinkDB
All DBs
Position
5505948..5506847
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AA seq
299 aa
AA seq
DB search
MDRFDAMRLFTRIVELGSFTKAANDLGMPRATVTHVIQQLETRLGVRLLQRTTRHVSATL
DGSAYYARCLQLMADLEEAETAFDSSAASPKGRLRVDFQGTLAMHFVMPHLPQFLASYPD
IELEIGLGDRAVDLVREGIDCVLRVGQLRESSLVARKVASLTQVTCAGSAYLKKMGVPRT
LDDLQQHQAVNFFSSVSGKILPFEFLVDGKEREVMMQGRVAVNTAEAYEKCCIDNLGLIQ
APRYHIADQLADGRLQEVLPEFRPAPMPVSIMYPHHRQLSRRVRVLVDWLADLMSRGET
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtttcgacgccatgcgtctgtttacccgcatcgtggaactgggcagcttcacc
aaggcggcgaatgacctgggcatgccgcgcgccaccgtgacgcatgtgatccagcaactg
gaaacgcggctcggcgtgcgcctgctgcagcgcaccacgcgccacgtcagcgcgacgctg
gacggcagcgcctattacgcgcgctgcctgcaattgatggccgacctggaagaggctgaa
acggccttcgacagcagcgccgccagtcccaagggacgactgcgggtcgatttccagggt
acgctggcgatgcatttcgtgatgccgcatttgccgcaattcctggcaagctatccggac
atcgagctggaaatcggcctcggcgaccgcgccgtcgacctggtacgcgaaggcatcgac
tgcgtgctgcgagtcggccagttgcgcgaatcgagcctggtggcgcgcaaggtcgcgtcg
ctgacccaggtgacgtgcgccggcagcgcctacctgaaaaagatgggcgtgccgcgcacg
ctggacgatttgcaacaacaccaggcggtgaatttcttttcttccgtcagcggcaagatc
ttgccattcgaattcctggtcgatggcaaagagcgtgaggtgatgatgcaggggcgggtc
gcggtcaacaccgccgaagcctatgaaaaatgttgcatcgataacctgggcttgatccag
gcgccgcgctaccacatcgcagaccagttggcagatggcagattgcaagaagtgctgccg
gaattccggcccgcgccgatgccggtttccatcatgtacccgcaccaccggcaattgtcg
cgccgggtgcgggtactggtcgactggctcgccgatttgatgagccgcggagaaacctga
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