KEGG   Janthinobacterium agaricidamnosum: GJA_5141
Entry
GJA_5141          CDS       T03157                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
jag  Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:jag00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:jag02048]
    GJA_5141 (hsdR)
Enzymes [BR:jag01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GJA_5141 (hsdR)
Prokaryotic defense system [BR:jag02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GJA_5141 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII
Other DBs
NCBI-ProteinID: CDG85739
UniProt: W0VA91
LinkDB
Position
complement(5515406..5518378)
AA seq 990 aa
MADGKKHQPTIHVIDWTDATANRWDVTEELEVLAAQGTYHRKPDVVCFVNGIPLAVIEAK
RPESGGGSHPSKAMVNEGISQHLRNQRPDEIPNLFAYAQLLLSISQTDGRYGTTHTAAKF
WAKWREEEFDEAHMQARKNASLTPKVRGALFEGKPVALATYFDALWSAPMQATEQDRLLV
SLLTPARLLEFLRGYVLFDRKVGKIVARYQQFFGIRSLLTRIGQLRPDGGREGGVVWHTT
GSGKSFTMVFLTKALLLVETLKECRVVVVTDRIDLETQLSRNFMTGGAFGSSIATQKDGE
KSRSLSGRDLARRIGSGTERITFTLVHKFNTASKLPECRNDSANMIVLVDEGHRSHGGET
HERMKKALPKAAYIAFTGTPLLKNEKTANKFGPIVHAYTMQRAVEDETVAPLLYEERMPE
LDINEDAVNRWFEKITSNLSDAQRIDLKRKFAKKGVIYGAANRIELIAWDIATHFSENIK
KLDLGLKGQMATDSKLDAIRYKKALDDTGLVTSAVVVSAPDTREGNADVDEDTLPEVQKW
WKQTMANFGNDAEAYEKRIVNDFGTDGAPDLLIVVDKLLTGFDEPRNTVLYIDKPLKGHN
LIQAVARVNRLHDAKRYGVLVDYRGILKELDTAIRGYQDLETRTQGGFDVSDLEGLYHQF
STEYKRLPTLHDHLWSFFKSVSNKLDREQYRQVLSPKFVKGSDGEEYDERQKLRDDFYEA
LTAFGLCLQTALSSRSFFEDKSFSEELIARYKADLRFFTELRQTARRDAMETVDYSVYEE
QIRKLVDKQVIGTEVRQPEGVYLVHQLGKVEDPKDWSEEKTRNETDMIRTRLRKTIEQDL
VEDPYAQKVFGELLRQAIAEAEAMFDHPLKQYALFQAFAQQLESRTIPGVPEALADKPHA
KAYFGAIRLVLGEDAFAAHSSEAVDGLVQQALAMDTLVRDAVAENSLNPQNIEAAIRKGL
LPLLFGTLGLDNAKQVVEQVIQITRVGLSK
NT seq 2973 nt   +upstreamnt  +downstreamnt
atggccgacggcaagaagcaccaacccaccatccacgtgatcgactggactgatgcgaca
gccaaccgttgggatgtgaccgaagagttggaagtgctggccgcacaaggcacatatcat
cgcaagccggacgtggtgtgtttcgtgaacggcattccattggcggtgatcgaagccaag
cgacctgagtcaggcggcggtagccacccatccaaggccatggtgaacgagggtatcagc
cagcacttgcgcaatcagcggcctgacgaaattcccaacttgtttgcctacgctcagttg
ttgctctccattagccagaccgatggacgctatggcactacccatacggccgcgaaattc
tgggccaagtggcgtgaagaagagttcgacgaggcgcatatgcaagctcgcaagaacgca
tcgctgacgccgaaagtgcgcggtgcgctgtttgaaggcaagcctgtcgccctggccacc
tactttgacgcactatggagcgctcctatgcaggcaaccgaacaggaccgcttgttggtc
agtttgctaacacccgcccgcttgctagaattcctgcgcggctatgtgcttttcgaccgc
aaggtgggcaagatcgtggcccgctaccagcagttctttggcatccgctcgctgctgaca
cgcattggccaattgcgcccggatgggggccgagagggaggcgttgtgtggcacaccaca
ggctcgggcaagagcttcaccatggtgttcctgaccaaagcgctgctcttggtggaaacc
ttgaaggaatgccgcgtggtggtagtgaccgaccgcatcgatctggaaacccaactctcg
cgcaattttatgactggcggcgcctttggctccagcatcgccacgcagaaagacggagag
aaaagccgcagtctttccggtcgagatttggcccgccgcatcgggagcggaacagagcgc
atcacgttcacgttggtgcacaagttcaacacagcatccaagctgcccgagtgccggaac
gactcggccaacatgatcgtgctagtggatgagggccatcgcagccatggcggcgagact
cacgagcgcatgaagaaggcgcttccaaaagcagcttacatcgcctttactggcacccct
ttattgaagaatgagaagacggccaataagttcggtcccatcgttcacgcctacacgatg
cagcgtgcggtggaggacgaaacggtcgcccctttgctttacgaagaacgcatgccggaa
ctcgacatcaacgaagacgctgtcaatcgttggttcgagaagatcaccagcaacctcagc
gacgcccagcgcattgacttgaagagaaagttcgctaagaagggggtcatctacggtgca
gctaaccgcatcgagctaattgcttgggatatcgctacccacttcagcgagaacatcaaa
aagctcgatctggggctaaaaggccagatggcgacggacagcaagctcgatgcgattcgc
tacaagaaagccttggacgataccggtctggtgaccagtgccgtagtggtctcggccccc
gacacgcgagaaggcaacgctgacgtggacgaagataccctgcccgaggtgcagaaatgg
tggaagcagaccatggccaatttcggtaacgacgccgaggcctatgaaaagcggatcgtc
aacgactttggcaccgacggcgctccggacttgttgatcgtggtggacaagctgctgacc
ggattcgacgagccgcgcaacaccgtgctctatattgacaagccgttgaaaggccacaac
ctcatacaggcagtggcacgcgtaaatcgtctgcatgatgctaagcggtatggcgtgttg
gtggactaccgaggcatcttgaaggaattggacaccgcaatccgtggataccaggacttg
gaaacccgaacgcagggcggctttgatgtcagcgatctcgaagggctgtaccaccaattc
agcacggaatacaagcgcctgccgacgttgcatgaccacttgtggtcgttcttcaaatcg
gtctccaacaagctagatcgcgagcagtatcgtcaggtgctgagcccaaagtttgtgaaa
ggcagtgatggagaagagtatgacgaacgtcagaaattacgtgacgatttctatgaagcg
ctgaccgctttcggtctgtgtctacagactgcactatcgtctcgcagctttttcgaagac
aagagcttctcggaggaattgattgcgcgatacaaagctgacctgcgcttcttcactgag
ctgcggcaaaccgcccgccgggacgcgatggagactgtggactatagcgtctatgaagag
caaatccgtaagttggtagataagcaagtcatcggaaccgaagtgcgacaacctgagggc
gtgtacttggtgcaccagttgggcaaggtcgaagaccctaaagactggtctgaagaaaag
acgcgtaatgaaacggacatgattcgtacccgcctgcgtaagactatcgaacaggactta
gtggaggacccctatgcgcaaaaggtgttcggtgaactgctgaggcaagccattgccgag
gcggaggccatgttcgatcatccgctaaagcagtacgctctgtttcaggccttcgcgcaa
caactggagtctcgaacgataccgggcgtgccggaggccttggcagataaaccacatgcc
aaggcctactttggcgcgattcgtctggtgctgggggaggatgcctttgctgcgcatagc
agtgaggctgtggacggcttggtgcagcaggctttagcgatggacactttagttcgcgat
gcagtcgcagaaaactcgctcaacccgcagaatatcgaagcggcaatccgtaagggcttg
ttgccgctgttgttcggcaccctgggtctcgacaatgcaaagcaagtggtggagcaggtc
atccagattacgcgtgtggggctgagcaagtga

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