Janthinobacterium agaricidamnosum: GJA_5456
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Entry
GJA_5456 CDS
T03157
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
jag
Janthinobacterium agaricidamnosum
Pathway
jag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJA_5456 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jag03400
]
GJA_5456 (ung)
Enzymes [BR:
jag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GJA_5456 (ung)
DNA repair and recombination proteins [BR:
jag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GJA_5456 (ung)
Prokaryotic type
GJA_5456 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
CDG86052
UniProt:
W0VFB8
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All DBs
Position
5858290..5858952
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AA seq
220 aa
AA seq
DB search
MTVRIEASWKEHLQAEFDLPYWDTLTAFVKAEYAAGPCFPAGKNIFRAFDLTPFDDVKVV
ILGQDPYHTPGAAMGFCFSVPDGNRPQPSLQNIFQELEQDIGVRRTQTDLSDWAEQGVFL
LNSVLTVRARTAGSHAGKGWENFTDSAIKHLSDERDNLVFILWGSYAISKKAFIDARKHL
VLTSPHPSPFSAHKGFFGSKPFSRANDYLVSKGKTSVIWA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccgcatcgaagcctcctggaaagaacacctgcaagccgaattcgacctgccc
tattgggacacgctaaccgccttcgtcaaggccgaatacgcggccgggccgtgtttcccg
gccggtaagaacatcttccgcgccttcgacctgacgccgttcgacgatgtcaaagtggtg
atactgggacaagacccgtaccacacgcccggcgcggcgatgggtttctgcttctccgtg
ccagatggaaatcggccgcaaccgagcctgcaaaatatcttccaggagctcgaacaagac
atcggcgtccgccgcacgcagacggatttgtcggactgggccgaacagggcgtgttcctg
ctcaacagcgtgctaacggtgcgtgcccggaccgccggttcgcatgccggcaaggggtgg
gaaaactttaccgacagcgccatcaagcatttgtcggacgaacgcgacaacctggtgttc
atcctgtggggcagttacgcgatctcgaaaaaagcgttcatcgacgcccgcaagcatttg
gtgctgacgtcgccgcacccgtcgcctttttcagcgcacaagggcttcttcggcagcaaa
ccgttttccagggctaatgattatctggtttcaaagggcaagacgtcggtgatctgggcg
tga
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