Janthinobacterium agaricidamnosum: GJA_926
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Entry
GJA_926 CDS
T03157
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
jag
Janthinobacterium agaricidamnosum
Pathway
jag00521
Streptomycin biosynthesis
jag00523
Polyketide sugar unit biosynthesis
jag00525
Acarbose and validamycin biosynthesis
jag00541
Biosynthesis of various nucleotide sugars
jag01055
Biosynthesis of vancomycin group antibiotics
jag01100
Metabolic pathways
jag01110
Biosynthesis of secondary metabolites
jag01250
Biosynthesis of nucleotide sugars
Module
jag_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GJA_926 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GJA_926 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GJA_926 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GJA_926 (rfbB)
00525 Acarbose and validamycin biosynthesis
GJA_926 (rfbB)
Enzymes [BR:
jag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GJA_926 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
CDG81582
UniProt:
W0V2U0
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Position
1027935..1029014
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AA seq
359 aa
AA seq
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MILVSGGAGFIGSNFVIDWLAQCDEPVINLDKLTYAGNLQNLQSLEQDPRHVFVRGDICD
SALLASLLAEYRPRAVLHFAAESHVDRSILGPSAFVSTNVNGTFNLLEAVRGHWLALPED
ERAGFRFLHVSTDEVYGTLGPDDAPFSETTPYAPNSPYSATKAASDHLVRAYHHTYGLPT
LTTNCSNNYGAFHFPEKLIPLVIANARAGKPLPIYGDGQQVRDWLYVNDHCAAIRRVLAA
GVSGETYNIGGWNEKTNLEVVHTLCDMLDRLDPKSDGTSYRTQITYVADRPGHDRRYAID
AGKIERQLGWKPEQTFESGIARTVQWYLDHSDWVANVQSGAYLNWVEQNYAQRSAPEVI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgattttagtgagcggtggcgccgggtttatcggttcgaattttgtgattgactggttg
gcgcagtgcgacgagccggtgattaatctcgacaagctgacgtatgccggcaatctgcaa
aatctgcagtcgttggagcaagatccgaggcatgtttttgtcaggggcgatatctgcgat
agcgctttgctcgctagcttgctggccgaataccggccgcgtgcggtgcttcattttgct
gcggaaagccatgttgaccgctcgattcttggtccgtcggccttcgtttccaccaacgtt
aatggcacgttcaatttgctggaagcggtgcgtggccactggctggccttgccggaagac
gaacgggccggttttcgctttctgcacgtatctaccgatgaagtgtatggaacgctggga
ccggacgatgcgccattttcagaaaccacgccatatgcgccgaacagcccgtattctgcg
accaaggccgcttccgatcatttggtaagggcctatcaccatacctatggtttgcctacg
ctgaccaccaattgttccaataactacggcgccttccattttccggaaaaactgattccg
ctcgtgatcgccaatgcccgtgcgggcaagccgctgcctatctatggcgatgggcagcaa
gtccgtgactggctgtatgtcaacgatcattgtgccgcaatccgccgcgtgctggcggca
ggcgtttctggcgaaacttataatattggcggttggaatgaaaagaccaatctggaggtg
gtgcatacgctatgcgacatgctggatcgtctcgatccgaagtccgatggcacgtcttac
cgcacacaaatcacgtatgttgccgaccgtcctggtcatgaccgccgttatgctatcgat
gccggcaagatcgagcgccagctgggatggaagcccgagcaaacttttgagagcggtatc
gccaggaccgtgcagtggtatctggatcactccgactgggtcgccaacgtccagtctggc
gcttacttgaattgggtcgagcagaattatgcgcagcgcagcgcgccggaggtgatttga
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