Janthinobacterium agaricidamnosum: GJA_949
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Entry
GJA_949 CDS
T03157
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jag
Janthinobacterium agaricidamnosum
Pathway
jag03030
DNA replication
jag03430
Mismatch repair
jag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJA_949 (dnaE)
03430 Mismatch repair
GJA_949 (dnaE)
03440 Homologous recombination
GJA_949 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jag03032
]
GJA_949 (dnaE)
03400 DNA repair and recombination proteins [BR:
jag03400
]
GJA_949 (dnaE)
Enzymes [BR:
jag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJA_949 (dnaE)
DNA replication proteins [BR:
jag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJA_949 (dnaE)
DNA repair and recombination proteins [BR:
jag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJA_949 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RMI2
HROB
Motif
Other DBs
NCBI-ProteinID:
CDG81605
UniProt:
W0V1W6
LinkDB
All DBs
Position
1053665..1057201
Genome browser
AA seq
1178 aa
AA seq
DB search
MQDSGAPLAAGQAPQGPAFVHLRVHSEYSIVDGLVRIDDMVAAAAKDKQAALAVTDLSNL
FGMVKFYKAARGKGIKPVVGVDVWISNDDNRDKPSRLLLLAKNRMGYLQLCELLSQAWLT
NQYKGRAEIRIEWLEQLASTPSKLLAGVSPANGLIALSGAHFGDVGIAIENGNLALAERH
AQRWAAIFPGHYYIEIQRGGQPSQERQVRHSVALASKLGLPVVATHPVQFIDQDEFIAHE
ARTCIAEGEMLANAKRVKRFNGQQCFKSQAEMAELFADLPAALANSVEIAKRCNLTLVLG
KPQLPDFPTPPGVSIDEFLVSESKAGLEQRLLQLFPDPARREAQRARYEERLKFETDTII
KMGFPGYFLIVAEFIRWAKENGVPVGPGRGSGAGSLVAYSLLITDLDPLQYNLLFERFLN
PERVSMPDFDIDFCQEGRDRVIQHVKDLYGKEAVSQIATFGTMAAKGAIRDVGRVMDFGY
NFCDGISKLIPFKPGKPVSIADAIEEEPLLKERLENEEEVKQLLDLAQQVEGITRNIGMH
AGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRY
IKQLDPAHANFDLAALPLNDKPSYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIA
LVALYRPGPMDLIPDFCKRKHGERFDYPDPRTESILSETYGIMVYQEQVMQMAQIVGGYS
LGGADMLRRAMGKKKAEEMAEHREIFRAGAAKDGLTAEKADEIFDLMEKFAGYGFNKSHA
AAYALLSYHTAYLKAHHTAAFMAANLSLAMDDTDKIKILVEDALDVCKLTLLPPDINLSD
YRFTPDGPPPSVSGKKVSNIRYGLGAVKGSGQNAIEAIIAARTSGGPFTSLFDFCKRVDK
RQINRRTIESLIRSGAFDCFKVDRAVLLASVAFAMECADQDAKAANQVSLFGGDDSDMVA
PPEYVKVAPWSDKQRLTEEKIALGFYLSGHLFDTYAPEARRFARTKLSELDPSREPRMMA
GVITGLRTQMTQRGKIIIVTLDDKSGTVEVTVYNELFEQNKRIFKEDEFLAVVGKVSEDR
FTGGLRITAEKAFDIVAARIQYGRQLGLVLPATLESKSIREVLAPFRSDSGLPIAARVSP
QGVSCTLQFGDDWRVAPSDDLQLALQQVLGATEVEIEY
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacagcggcgcgccgctcgccgccgggcaagctccacaggggccggcattcgtg
cacctgcgggtgcactcggaatactcgatcgtcgatgggctggtgcgcatcgacgatatg
gttgctgcggcggccaaggacaagcaagccgcgctggcggtgaccgatttgtcgaatttg
ttcggcatggtcaagttttacaaggccgcgcgcggcaagggcatcaagccggtagtcggc
gtcgatgtgtggatcagcaacgacgataaccgcgacaagccgtcgcgcctgctgttgctg
gcgaagaaccgcatgggttatctgcaattgtgcgaattgctgtcgcaagcgtggctgacc
aaccagtacaagggccgcgctgaaatccgcatcgagtggctggagcaactggccagcacg
ccgtcgaagttgctggctggcgtcagcccggcgaatggcttgatcgccttgtccggcgcg
catttcggcgatgtcggcattgccatcgagaatggcaacctggcgctggccgaacgccat
gcgcagcgctgggcggcgattttccccggccattattacatcgagatccagcgcggcggc
cagcccagccaggaacggcaggtgcgccattcggtggcgctggcgtccaagctgggcttg
ccggtggtggccactcatccggtgcaattcatcgaccaggacgaattcattgcgcacgag
gcgcgcacctgtatcgccgaaggcgaaatgctggccaacgccaagcgcgtcaagcgcttt
aacggccagcaatgcttcaagagccaggccgagatggcggaattgttcgccgatttgcct
gccgcgctggccaattcggtcgaaatcgccaagcgctgcaatttgacgctggtgctgggc
aagccgcaattgccggatttcccgaccccgcccggcgtgagcatcgatgaattcctggtc
tccgaatcgaaggccggcctggagcagcgcctgctccagctgttccccgatccggccagg
cgcgaagcgcagcgcgcgcgctacgaggagcgcctgaaattcgagaccgacaccatcatc
aagatgggtttccccggctacttcctgatcgtggcggagtttatccgctgggccaaagaa
aacggcgtgccggtcggaccgggccgcggttccggcgccggctcgctggtggcgtattcg
ctgctgatcaccgacctcgacccgctgcagtacaacttgctgttcgagcggttcctgaac
ccggaacgggtctcgatgcccgacttcgatatcgacttttgccaggaagggcgcgaccgc
gtgatccagcacgtcaaggatttgtacggcaaggaggcggtctcgcagatcgccaccttc
ggtaccatggcggccaagggcgcgatccgcgacgtcggccgggtgatggatttcggctat
aacttttgcgacggcatttccaagctgatcccgttcaagccgggcaagccggtgtcgatc
gccgacgccatcgaggaagaaccgctgctcaaggagcgcctggaaaacgaggaagaggtc
aagcagctgctggacctggcgcagcaggtcgaaggcatcacgcgcaatatcggcatgcac
gcgggcggcgtgctgatcgcacccgggaaattgacggatttctgcccgctgtacacccag
ggcggcgattcgggcgtggtgtcgcaatacgacaaggacgacgtggaagccgtcggcctg
gtgaagttcgacttcctgggcctgaccacgctgaccatcctcgaccgcgcggtgcgctac
atcaagcagctcgatccggcgcacgccaatttcgacctggccgccttgccgctgaatgac
aagccgtcctacgacttgctgaccaaggcaaagaccgtggccgtgttccagctggagtcg
cgcggcatgcagggcatgctgaaagacgcgcggcccgaccgtttcgaggacattatcgcg
ctggtcgccttgtaccgcccgggtccgatggacctgatcccggatttctgcaagcgcaag
cacggcgaacgttttgattatcccgatccgcgcaccgaatcgattttgtccgaaacctac
ggcatcatggtctaccaggagcaggtgatgcagatggcgcagatcgtcggcggctactcg
ctgggcggcgccgacatgctgcgccgcgcgatgggcaagaagaaggccgaggagatggcc
gagcaccgcgagattttccgcgccggcgccgcgaaagacggcttgacggcggaaaaggcc
gacgagatcttcgacttgatggaaaagttcgccggctacggttttaacaaatcgcacgcc
gccgcctatgccttgctgtcctaccataccgcctacctgaaggcgcaccacaccgccgcg
ttcatggcggccaacttgtcgctggcgatggacgacaccgacaagatcaagatcctggtc
gaggatgcgctcgacgtctgcaagctgacgttattgccgccggacatcaatctgtccgac
taccgcttcacgccggacggcccgccgccgtcggtcagcggcaagaaagtcagcaacatc
cgctacggcctgggcgccgtcaaggggtcgggccagaatgcgatcgaggcgatcatcgcg
gcgcgcaccagcggcgggccgttcaccagcctgttcgatttctgcaagcgggtcgacaag
cgccagatcaaccggcgcaccatcgaatcgctgatacgcagcggcgccttcgattgtttc
aaggtcgaccgcgcggtattgctggcgtcggtggcgttcgcgatggaatgcgccgaccag
gacgccaaggcggccaaccaggtcagcctgttcggcggcgacgacagcgacatggtggcg
ccgcccgaatacgtcaaggtggcgccgtggagcgacaagcaacggctgaccgaggaaaag
atcgcgctcggcttttacctgtcgggccacctgttcgacacctatgcgccggaagcgcgc
cgtttcgcgcgcaccaagctgtcggaactggatccgtcgcgcgaaccgcgcatgatggcc
ggcgtgatcaccggtttgcggacccagatgacgcagcgcggcaagatcatcatcgtcacg
ctggacgacaagagcggtacggtggaagtgacggtgtataacgaattgttcgagcaaaac
aagcgcatcttcaaggaagacgaattcctggcggtggtcggcaaggtgtcggaagaccgc
ttcaccggcggtttgcggatcaccgccgaaaaggcgttcgacattgtcgcggcgcgcatc
cagtacggccgccagctggggctggtactgccggccacgctggaaagcaagagcatccgc
gaggtgctggcgccgttccgttcggacagcggcttgccgatcgcggcgcgggtcagcccg
caaggcgtcagttgcacgctgcaattcggcgacgactggcgggtggcgccatcggacgat
ttgcagttggcgctgcaacaggtgctgggtgcgaccgaggtcgagatcgagtattga
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integrated database retrieval system
