Janthinobacterium sp. HH102: JAB4_002160
Help
Entry
JAB4_002160 CDS
T08624
Symbol
ung_1
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JAB4_002160 (ung_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_002160 (ung_1)
Enzymes [BR:
jah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JAB4_002160 (ung_1)
DNA repair and recombination proteins [BR:
jah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JAB4_002160 (ung_1)
Prokaryotic type
JAB4_002160 (ung_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QOU70823
UniProt:
A0A853SU77
LinkDB
All DBs
Position
complement(251104..251772)
Genome browser
AA seq
222 aa
AA seq
DB search
MDVRIDASWKARLEGEFAQPYWERLAAFVKAEYAAGPCCPPGKLIFRAFDLTPFGQVKVV
ILGQDPYHTPGAAMGLCFSIPEGTPPQPSLQNIFKELHSDMGVARTRTDLSDWAEQGVFL
LNSVLTVRAGAAGSHAAKGWEKLTDSAIGHLSAEREHLVFILWGGYAQAKRTLIDPGKHL
VLAAPHPSPLSASKGFFGSKPFSQANAYLQAHHHAEIKWGNE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggacgtacgcatcgacgcatcgtggaaggcgcggctggagggggagtttgcccagccc
tactgggagcgcctggccgccttcgtcaaggccgaatatgcggcggggccgtgttgtcct
cccggtaaactcatttttcgcgccttcgacctgacgccgttcgggcaagtcaaggtggtg
atcctggggcaagacccgtatcacacgcccggtgccgccatggggctgtgcttttcgatt
cccgaaggcacgccgccgcagccgagcctgcagaatatcttcaaggaattacacagcgac
atgggcgtggcgcgcacgcgcacggatttgtccgactgggccgagcaaggcgtgttcctg
ctcaacagcgtgctgacggtgcgcgccggggcggccggttcgcatgcagccaaggggtgg
gaaaagctgacggacagcgccatcggccacctgtccgccgagcgcgaacaccttgtgttc
atcctgtggggcggctatgcgcaagccaagcgcactttgatcgaccccggcaagcacctg
gtgctggcagcgccccatccatctcccttgtcggccagcaaaggtttctttggcagcaag
ccgttcagccaggcaaatgcgtatctgcaggcgcatcatcatgccgaaatcaaatggggc
aatgagtaa
DBGET
integrated database retrieval system
