Janthinobacterium sp. HH102: JAB4_002500
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Entry
JAB4_002500 CDS
T08624
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JAB4_002500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_002500
Enzymes [BR:
jah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JAB4_002500
DNA repair and recombination proteins [BR:
jah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JAB4_002500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Rbx_binding
Motif
Other DBs
NCBI-ProteinID:
QOU70857
UniProt:
A0A853SUA4
LinkDB
All DBs
Position
287738..289201
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AA seq
487 aa
AA seq
DB search
MSTFVRLAQSFDAWRAAARELIARGVPPADVAWQSQPGDGDLFSSTPEATDTGAPPLRLP
RQLVELLESAACFNVHDRWAFLYQVLWRWQQGQHDVVSPADADGARLHAMVKAVHREEHD
MHAYVRFRERAESDGAPRFVAWFEPTHEVLPQVARHFARRMGKASWMIATPGASMLWDGA
TLHAGPALLRGAADIDDAGEALWLTYYRSIFNPARVNADLLHSHIPSRFWKNLPEGAIVP
AMLSGAANGERRTGQTASVGQRQGAAMIPISAERAQPVRGAATTLDQCRRCELWQHATQA
VPGTGPHTARIMLVGEQPGDQEDLAGLPFVGPAGALLDKAMREAGIARDSIYLTNAVKHF
KWEPRGKRRLHKTPAQREILACHGWLEEEIERGKPQVIVALGSTALKSVLQDGAASMTPL
IGTPIEHDGRWVVTVYHPSYVLRARDEESRRQAYAVIVDGLRQALRLLQEPHHGVAAGTS
CASSRRA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgttcgtgcggctggcgcaatcgttcgacgcgtggcgcgcggcggcgcgcgaa
ctgatcgcgcgcggcgtgccgcctgccgacgtggcctggcaatcgcagcccggcgacggc
gacctgttttcctccacgccagaggccacggataccggcgcgccaccgctgcgcctgccc
cgccagctggtggaactgctggagagcgccgcctgtttcaacgtgcatgaccgctgggcc
ttcctgtatcaggtgctgtggcgctggcagcagggccagcacgacgtggtgtccccggcc
gacgcggacggcgcgcgcctgcacgccatggtcaaggccgtgcaccgcgaggagcacgac
atgcatgcctacgtgcgcttccgcgagcgggccgaaagtgacggcgcgccccgttttgtc
gcctggttcgagcccacgcacgaggtgctgccgcaggtggcgcgccacttcgcgcgccgc
atgggaaaggccagctggatgatcgccacgcccggcgccagcatgctgtgggatggcgcc
accttgcacgcgggaccggccctgctgcgcggcgcggccgacatcgacgatgcgggcgaa
gcgctatggctgacgtactaccgcagcatcttcaaccccgcgcgcgtgaatgcggacttg
ctgcacagccatattccctcgcgtttctggaaaaatttacccgaaggcgccatcgtgccc
gccatgctgagcggcgcggccaacggcgagcggcgcacgggccagacggccagcgtggga
cagcggcagggcgccgccatgatcccgatcagcgcagagcgggcccaaccggtgcgcggg
gctgccacaacactggaccagtgccgccgctgcgaactgtggcagcatgccacgcaagcc
gtgcccggcacaggcccgcacaccgcccgcatcatgctcgtcggtgaacagccgggcgac
caggaagacctggccggactgccgttcgtcggcccggccggtgcgctgctggacaaagcc
atgcgggaagctggcatcgcgcgcgacagcatctatctgaccaatgccgtcaagcatttc
aagtgggaaccgcgcggcaagcgccgcctgcacaagaccccggcccagcgcgagatcctc
gcctgccatggctggctggaagaagagatcgaacgtggcaaaccacaggtgatcgtggcg
ctgggcagcacggcattgaaatccgtgctgcaggatggcgcggccagcatgacgccgctg
atcggcacgcccatcgaacacgacgggcgctgggtggtgaccgtgtatcacccgtcatat
gtgctgcgcgcacgggacgaagagagccggcgccaggcctacgcggtgattgtcgatggc
ttgcggcaggcgctgcggctactgcaggagccgcatcacggcgtcgccgccggcacttcc
tgcgcctcatcgcgccgcgcatag
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