Janthinobacterium sp. HH102: JAB4_003580
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Entry
JAB4_003580 CDS
T08624
Symbol
xylF
Name
(GenBank) D-xylose-binding periplasmic protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JAB4_003580 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jah02000
]
JAB4_003580 (xylF)
Transporters [BR:
jah02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
JAB4_003580 (xylF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
BRCT
Adhesin_P1_N
DUF4350
Mur_ligase
DUF8729
Motif
Other DBs
NCBI-ProteinID:
QOU70965
LinkDB
All DBs
Position
407461..408462
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AA seq
333 aa
AA seq
DB search
MNKIISAAIMTAMLALSSSAALADAKNPKIGFSIDDLRVERWTRDRDFFIAAAEKQGAKV
FVQSADASEQRQISQIENLISRGVDVLVIVPFNATVLNNTVKEAKKAGIKVLSYDRLILN
ADIDAYISFDNEKVGEMQAEGVTKLQPKGNYYLLGGSPTDNNAKMLREGQMKVLKPFIDK
GDIKIVGQQWVKDWSATEALSIVENALTANGNKIDAIVASNDGTAGGAIQALAAQKLAGK
VPVSGQDADLAAVKRVIAGTQSMTVYKPLKTIAAEAAKLAVQLARNEKPAYNSSYDNGLK
KVSTVLLKPTPLTKANVNILVDDGFYTKAQLGN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagatcatcagtgcagccatcatgaccgccatgctggcattgagcagcagcgcc
gccctggccgatgcgaaaaacccgaagatcggcttttccatcgacgacttgcgcgtggaa
cgctggacgcgcgaccgcgatttcttcatcgccgccgccgaaaagcagggcgccaaggtc
ttcgtgcagtcggccgacgccagcgagcagcgccagatttcgcagatcgaaaacctgatc
tcgcgcggcgtggacgtgctggtgatcgtgccgttcaacgccactgtgctcaacaacacc
gtcaaggaagcgaaaaaggccggcatcaaggtgttgtcgtatgaccgcctgatcctgaac
gccgatatcgatgcgtatatctcgttcgacaacgagaaagtgggcgagatgcaggccgaa
ggcgtgaccaagctgcagccgaagggcaattactatttgctgggcggttcgccgaccgac
aacaacgccaagatgctgcgcgaaggccagatgaaggtgctcaaaccgttcatcgacaag
ggcgatatcaagatcgtcggccagcagtgggtgaaggactggagcgccaccgaagcgttg
tccatcgtggaaaacgcgctgacggccaacggcaacaagatcgacgccatcgtcgcctcg
aacgacggcacggccggcggcgccatccaggccctggccgcgcaaaaactggccggcaag
gtgccggtctcgggccaggacgccgatctggcggcggtcaaacgcgtcatcgccggcacg
caatcgatgaccgtctacaaacccctgaaaaccatcgccgccgaagcggccaagctggcc
gtgcaactggcgcgcaatgaaaagcccgcctacaactccagctatgacaacggcctgaaa
aaagtcagcacggtgctgctcaaacccacgcccttgaccaaggcgaacgtgaacattctc
gtcgacgacggtttctataccaaggcgcagctgggtaattga
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