Janthinobacterium sp. HH102: JAB4_004880
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Entry
JAB4_004880 CDS
T08624
Name
(GenBank) Periplasmic binding protein domain protein
KO
K10439
ribose transport system substrate-binding protein
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah02010
ABC transporters
jah02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JAB4_004880
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JAB4_004880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jah02000
]
JAB4_004880
Transporters [BR:
jah02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
JAB4_004880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
QOU71092
LinkDB
All DBs
Position
552941..553909
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AA seq
322 aa
AA seq
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MKSFIRVAGMAVLVMQAWALPMGPAQAADKLVVGVAIPTATHSFTSGIVWWANQAKAELE
KAHPGLKIIVKTAATAPEQANQLQDMLTVNKINTLVIFPIESASLTQPVAQVKNKGVYVT
VVDRGLTNTQSQDAYIAGDNTAFGKLPAEYLAKSLNGKGNIVVLRGMPTTLDNERFDAFS
AVMKGHPEIKVLDAKYGNWNRDDAFKVMQDYLTRFKQIDAVWAADDDMAIGVQKAIAQAK
RTDIKQVFGGAGAKGAVKKIMDGSDPLIVADVSYSPKFMYDAIKLTTEARLKGDKLPANT
IIPSVLITRENAKQFYFPNSPF
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaagagctttatacgggtagcaggaatggcagtgctggtgatgcaggcgtgggcgctg
ccgatggggccggcgcaagccgctgacaagctcgtcgtcggcgtggccatccccacggcc
acgcacagttttacctcgggcatcgtgtggtgggccaaccaggccaaggcggagctggaa
aaagcgcatccggggctgaaaatcatcgtcaagacggccgccacggcgcccgaacaggcg
aaccagctgcaggatatgttgacggtgaacaagatcaacaccctggtgatcttccccatc
gaatcggcctcgctgacgcagcccgtggcgcaggtgaagaacaagggcgtgtacgtgacg
gtggtggaccgcggcttgacgaacacgcagtcgcaggatgcgtacattgcgggcgacaac
acggccttcggcaagctgccggccgaatacctggcgaaaagcctgaatggcaagggcaat
atcgtcgtgctgcgcggcatgccgaccaccctcgacaacgagcgctttgacgcgttttcc
gcagtcatgaagggccatcccgagatcaaggtcctggatgccaagtatggcaactggaac
cgcgacgatgccttcaaggtcatgcaggattatctgacccgtttcaaacagatcgacgcc
gtctgggccgccgatgacgacatggccatcggcgtgcagaaagccatcgcgcaagccaag
cgcacggacatcaagcaggtgttcggcggtgccggcgcgaagggcgcggtgaaaaagatc
atggacggttccgacccgctgatcgtggccgacgtgtcctactcgccgaagttcatgtac
gacgccatcaagctgacgacggaagcgcgcctgaaaggtgataaattgccggccaatacg
atcatcccgtcggtgctgatcacgcgcgagaacgccaagcagttttactttccgaactcg
cctttttaa
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