Janthinobacterium sp. HH102: JAB4_009840
Help
Entry
JAB4_009840 CDS
T08624
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JAB4_009840 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_009840 (exoA)
Enzymes [BR:
jah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JAB4_009840 (exoA)
DNA repair and recombination proteins [BR:
jah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JAB4_009840 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QOU71573
LinkDB
All DBs
Position
complement(1103566..1104342)
Genome browser
AA seq
258 aa
AA seq
DB search
MPKIISANLNGIRSAAKKGFFNWMGTQTADFICVQELKAQLPDMTPEFLNPHGYHGHFHY
AEKKGYSGTGVYSKVEPDAVHIGFGSPEFDAEGRYVRCDFGNLSVISVYCPSGSSGPERQ
EAKFRFMELFLPHLLELKALGREVVICGDWNIAHHEIDLKNWKGNKKNSGFLPEERAWLT
RVFDEVGFVDVHRGLDKREDQYTWWSNRGQAYAKNVGWRIDYHVATPGIAAQAHTVSVYK
DERFSDHAPLIIDYTVKG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaattatctccgccaacctgaacggcatccgttccgccgccaaaaaaggcttt
ttcaactggatgggcacgcagacggccgatttcatctgcgtacaggaattgaaggcgcag
ctgcccgacatgacgccggaattcctcaacccgcatggctaccatggccatttccactat
gccgagaaaaaggggtactccggcacgggcgtatacagcaaggtggaaccggacgccgtg
catatcggtttcggcagccccgaattcgatgccgaaggccgctacgtgcgctgcgatttc
ggcaacctgtccgtcatttccgtgtactgcccctccggctcgtccgggccggaacgccag
gaagccaagttccgcttcatggaactgttcctgccgcacctgctggaattgaaggcgctg
ggccgcgaagtggtcatctgcggcgactggaacatcgcccaccacgaaatcgacctgaag
aactggaagggcaacaaaaagaattccggcttcctgccggaagagcgcgcgtggctgacg
cgcgtcttcgacgaagtgggctttgtcgacgtgcaccgcggcctggacaagcgcgaagac
cagtacacgtggtggagcaaccgcggacaagcctacgcgaagaacgtgggctggcgcatc
gattaccacgtcgccacgcccggcatcgcagcccaggcgcatacggtcagcgtctacaag
gacgagcggttttccgatcacgcaccgttgatcatcgattacacggtcaagggctga
DBGET
integrated database retrieval system
