Janthinobacterium sp. HH102: JAB4_010870
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Entry
JAB4_010870 CDS
T08624
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah03030
DNA replication
jah03410
Base excision repair
jah03420
Nucleotide excision repair
jah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JAB4_010870 (polA_1)
03410 Base excision repair
JAB4_010870 (polA_1)
03420 Nucleotide excision repair
JAB4_010870 (polA_1)
03440 Homologous recombination
JAB4_010870 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jah03032
]
JAB4_010870 (polA_1)
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_010870 (polA_1)
Enzymes [BR:
jah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JAB4_010870 (polA_1)
DNA replication proteins [BR:
jah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JAB4_010870 (polA_1)
DNA repair and recombination proteins [BR:
jah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JAB4_010870 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JAB4_010870 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DUF2167
Motif
Other DBs
NCBI-ProteinID:
QOU71676
UniProt:
A0A853SXY0
LinkDB
All DBs
Position
1215289..1218051
Genome browser
AA seq
920 aa
AA seq
DB search
MQNTLLLVDGSSYLYRAFHALPDLRSPDGYPTGAMHGMVNMLRRLRADYPAAYIACVFDA
KGKTFRDDMYPEYKATRASMPDDLRLQIEPIHEAVRAMGWPILMVDGVEADDVIGTLAVQ
AAAAGMNVVVSTGDKDLAQLVNSQVMLINTMSNEKLDEAAVLAKFGVPPNRIIDYLSLIG
DTVDNVPGVSKCGPKTAVKWLTLYDSLEGVMENAAKVGGAVGENLRTALPWLPQARALIT
VKTDCDLSGHMTTIADSLVAKHEDKEALLAFFNRYGFKALLRELGAAPPPMSPVGAPPAA
GASAVNTTGDMFADAAPAVEAEYETVLTDAQLDKWIALIDAAALTAVDTETTSLEPMTAQ
MVGISLSVAEHAACYIPLAHDYAGAPEQLTREHVLAKLRPWLEDETKPKLGQNLKYDSHI
FANHGVTLRGIAHDTLLESYVFESHKKHDMDSLALRHLNYATIPFEDVCGKGAKQITFNQ
VEVEQAAKYAAEDADVTLRLHNAMWGNVANDEKLTFIYEKIEMPTAVVLQKIERNGVLID
DELLNIQSAELAVKILELEKKAYELAEQPFNLGSPKQIGEIFFEKLKLPVVKKTPTGAPS
TDEEVLQKLAEDYPLPKVLLEYRGMAKLKSTYTDKLPKMINVTTGRVHTNYAQAVAVTGR
LASNDPNLQNIPIRSAEGRRIREAFIAPPGSHIVSADYSQIELRIMAHISGDEAMLRAFA
DGIDIHRATAAEIFGVPAAEVQSEQRRYAKVINFGLIYGMSAFGLAGNLGVDRTAAQSYI
DRYFARFSGVKQYMEDTRQQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPM
QGTAADLIKLAMIAVQGWLETDGLQTKMIMQVHDELVLEVPDAELELVKRKLPELMAGVA
ALKVPLTAEVGVGRNWDEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaccctgctgttagtcgacggttccagttacctttatcgcgccttccatgcg
ctgcccgacctgcgcagcccggacggttaccccacgggcgccatgcatggcatggtcaac
atgctgcgccgcctgcgcgccgattacccggccgcctacatcgcctgcgtgttcgacgcc
aagggtaaaactttccgcgatgatatgtatcccgaatacaaggccacgcgcgcctcgatg
ccggacgacctgcggctgcagatcgaaccgatccacgaagccgtgcgcgccatgggctgg
ccgattctgatggtcgacggcgtcgaagccgatgatgtgatcggcaccctggccgtgcag
gcggcggccgccggcatgaacgtggtggtgtcgacgggcgacaaggatctggcgcagctg
gtcaacagccaggtgatgctgatcaataccatgagcaatgaaaagctcgacgaagcggcc
gtgctggccaagttcggcgtgccgcccaaccgcatcatcgattatctgtcgctgatcggc
gatacggtcgacaacgtgccgggcgtgtcgaaatgcgggccgaaaacggcagtcaagtgg
ctgaccctgtacgacagcctggaaggcgtgatggaaaacgcggccaaggtgggcggcgcc
gtgggggaaaacctgcgcacggccctgccatggctgccgcaggcgcgcgccttgatcacc
gtcaagaccgattgcgatctgtccggccacatgacgacgattgccgattcgctggtggcg
aaacacgaagacaaggaagcactgctggccttcttcaaccgctacggcttcaaggcgctg
ctgcgcgaactgggcgcggcgccgccgccgatgtcgcccgtcggcgcaccgcctgccgcc
ggcgcctccgccgtcaacacgacgggcgacatgtttgccgacgcggcgccagcggtggaa
gccgagtatgaaaccgtgctgacggatgcccagctcgacaaatggatcgcgctgatcgat
gcggctgccctgacggccgtcgacacggaaaccacctcgctggaaccgatgacggcgcaa
atggtcggcatttccctctccgtggccgagcacgccgcctgttacatcccgctggcccac
gactacgcgggcgcgccggaacagttgacgcgcgaacacgtgctggcgaaattgcgcccg
tggctcgaagatgaaaccaagcccaagctgggccagaacctgaaatatgacagccacatc
ttcgccaaccatggcgtgacgttgcgcggcatcgcccacgacaccttgctcgaatcgtat
gtattcgaatcgcacaagaaacacgacatggacagcctggccctgcgccacctgaactac
gcgaccatcccgttcgaggacgtgtgcggcaagggcgccaagcagatcaccttcaaccag
gtcgaggtggagcaggcggcaaagtacgcggccgaagatgccgacgtcaccttgcgcttg
cacaatgccatgtggggcaatgtggcgaacgacgaaaaactcacgtttatctatgaaaag
atcgagatgccgacggccgtggtcttgcaaaagatcgagcgcaacggcgtgctgatcgac
gacgaattgctcaacatccagtcggccgagctggccgtaaagatcctcgagctggaaaag
aaggcgtatgaactggccgagcagccgttcaacctgggttcgcccaagcagatcggcgaa
atcttcttcgagaaattgaagctgccggtggtcaagaagaccccgacgggcgcgccctcg
acggatgaagaagtgctgcaaaagctggccgaggattatccgctgccgaaagtgctgctc
gagtaccgcggcatggccaagctgaagtcgacgtataccgataaattgccgaagatgatc
aacgttacgacgggccgcgtgcatacgaactatgcgcaagccgtggccgtgacggggcgg
ctggcgtcgaacgacccgaacttgcagaatattcccatccgcagtgcggaaggccgccgc
atccgcgaagcgtttattgcgccgccgggcagccatatcgtgtcggccgactattcgcag
atcgaattgcgcatcatggcgcatatctctggcgacgaagcgatgctgcgcgcgtttgcc
gacggcatcgatattcaccgcgccacggccgctgaaatcttcggcgtgccggccgcggaa
gtgcagagcgaacagcgccgctacgccaaagtgatcaacttcggtttgatctacggcatg
agtgcattcggcctggccggtaatctgggcgtggaccgcacggccgcacaaagctatatc
gaccgttactttgcccgtttttccggagtgaaacagtacatggaagacacgcgccagcaa
gccaaggcgcgcggctacgtggaaaccgtgtttggccgccgtttgtggttgccagaaatt
aattcgccgaacggcccgcgccgccagggcgcggaacgggccgcgatcaacgcgccgatg
cagggcacggctgccgacctgatcaagctggccatgatcgccgtgcaaggctggctggaa
acggacggcttgcagacgaagatgatcatgcaggtgcacgatgaactggtgttggaagtg
ccggacgcggaactggaactggtcaagcgcaagctgccggaactgatggccggcgtggcc
gcgctgaaagtgccgctgacggccgaggtaggcgtaggcaggaactgggacgaagcgcat
tga
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