Janthinobacterium sp. HH102: JAB4_013930
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Entry
JAB4_013930 CDS
T08624
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jah
Janthinobacterium sp. HH102
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jah03016
]
JAB4_013930 (truB)
Enzymes [BR:
jah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JAB4_013930 (truB)
Transfer RNA biogenesis [BR:
jah03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JAB4_013930 (truB)
Prokaryotic type
JAB4_013930 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TcfC
Motif
Other DBs
NCBI-ProteinID:
QOU71971
UniProt:
A0A853SWB3
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All DBs
Position
1574945..1575880
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AA seq
311 aa
AA seq
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MAGPKKPPGMKRVRDLVDGVLLLDKPVGWSSNDALIKAKRVLNAKKAGHTGTLDPFATGL
LPLCFGEATKFSQDLLEADKTYETLVHLGQTTDTGDTEGAVLETREVNVTQEQIEAVLAR
FRGPILQTPPMYSALKRDGKPLYEYARAGITLEREARPVTIHKLEFLGYEAPFLKLSVMC
SKGTYIRVLGEDIGHALGCGGHLNALRRTQVGNLTLDGVVTLDELTAHAAPLSLLAPVDA
LLSSFPAVQLTEELAKRFLHGQRIALGKEDVAVPNEPGRVRVYHDSKLLGTGQLQEYSIL
APERLIATAHQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtggcgggtccgaagaaaccaccgggcatgaagcgggtgcgcgacctggtcgacggcgtc
ttgttgctcgataagcccgtgggctggtccagcaacgacgccctgatcaaggccaagcgc
gtgctgaacgcgaaaaaagccggccatacgggcaccctggatccgttcgccacgggcttg
ctgccgctgtgctttggcgaggcgacgaagttctcgcaggacttgctggaagccgacaag
acctacgaaaccctggtgcacctggggcagacgacggatacgggcgacacggaaggcgca
gtgctggaaacgcgcgaggtcaacgtcacgcaagagcagatcgaagccgtgctggcgcgg
ttccgcgggcctatcctgcagacgccgcccatgtactcggccttgaaaagggacggcaag
cccctatatgagtatgcaagggcaggcatcaccctggagcgcgaagcgcgcccggtgacc
atccacaagctcgagttcctcggctatgaagccccgttcctgaaattgtccgtgatgtgc
agcaagggcacgtatatccgcgtgctgggcgaagacatcggccatgccctcggttgcggc
ggccatctgaacgccttgcgccgcacgcaggtgggcaacctgacgcttgacggcgtcgtc
accctcgatgagttgacggcgcatgccgcgccgctgagtctgctggcgcccgtcgatgca
ttattgtcgagctttccggccgtccagctgacggaagaattggccaagcgtttcctgcat
ggccagcgcatcgcgctgggcaaggaagacgtcgccgtaccaaacgagccgggcagggtg
cgcgtgtatcacgacagcaagctgctgggcacgggccagttacaggagtacagcatcctg
gcgcccgagcgcctcattgccacggcacatcaataa
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