Janthinobacterium sp. HH102: JAB4_014820
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Entry
JAB4_014820 CDS
T08624
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JAB4_014820 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_014820 (sbcB)
Enzymes [BR:
jah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
JAB4_014820 (sbcB)
DNA repair and recombination proteins [BR:
jah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JAB4_014820 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JAB4_014820 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JAB4_014820 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QOU72058
UniProt:
A0A853SRI3
LinkDB
All DBs
Position
complement(1681828..1683276)
Genome browser
AA seq
482 aa
AA seq
DB search
MTNQTFLWHDYETFGAQPRRDRPAQFAAIRTDAELNEIGEPIMLYCQPANDFLPDPQSCL
ITGITPQQCLQLGVPEHQFAATIEAAFSEPGTIGVGYNTIRFDDEVTRFLFWRNLIDPYA
REWKNHCGRWDILDVVRMTHALRPEGILWPKRDDGQTSFKLEHLSKANGLAHEAAHDALS
DVRATIALARLIREKQPKLFEFCLALHKKDRVASEMGMHLAAGERQPFLHVSGMFPAERG
CLGVVWPLATHPSNKNEILVWDCAYDPRELFELDADTIRTRLFTRKEAMPEGMTRLPVKS
VHLNKSPMLVGNLKTLSPAMAAQWGIDVDAAKINAQLAAAAPNMDAIWAEVFQRPGANTA
LDVDEDLYNGFVSNDDRRLLESLRRETPAKLATARPSFADERLQELLFRYRARNFPQTLS
EAESLRWEQHRAARLFDGDGGARTIEMLFTEIDLLSESVDERGEEILGELYDYAEMVAPM
RD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccagacctttctttggcacgactacgaaacctttggcgcccagccgcgccgc
gaccgcccggcccagttcgccgcgatccgcacggatgccgaactcaacgagatcggcgaa
ccgatcatgttgtattgccagcctgcaaatgatttcctgcccgacccgcaatcgtgcctg
atcacgggcatcacgccgcagcaatgtctgcagctgggcgtgcccgaacaccagttcgcc
gccaccatcgaagcggccttttcggaaccgggcaccatcggcgtcggctacaacaccatc
cgtttcgacgatgaagtcacgcgcttcctgttctggcgcaacctgatcgacccgtatgcg
cgcgaatggaagaaccattgcggccgctgggacatcctcgacgtggtgcgcatgacgcac
gcgctgcgcccggaaggtattctatggccgaagcgcgacgatggccagaccagtttcaaa
ctggaacacttgagcaaggccaatggcctggcccacgaagcggcacatgatgcgctgtcc
gacgtgcgcgccaccatcgccctggcacgattgatccgcgaaaagcagccgaaactgttc
gaattctgcctggccctgcacaagaaggacagggtcgccagcgaaatgggcatgcacctg
gccgccggagagcgccagcccttcctgcacgtgtcgggcatgttccccgccgaacggggt
tgcctgggcgtcgtctggccgctggccacgcatccgagcaacaagaacgagatcctcgtc
tgggattgcgcctacgacccgcgcgaactgttcgagctggacgccgacaccatccgcacg
cgtttgttcacgcgcaaggaagcgatgcccgaagggatgacgcgcctgcccgtgaaaagc
gtccatttgaacaagtcgcccatgttggtcggcaatttaaagaccttgtcgccggccatg
gccgcgcaatggggcatcgacgtggatgcggcgaagatcaacgcccagctggccgccgcg
gcgccgaacatggatgccatctgggccgaagtgttccagcgcccgggcgccaatacggcc
ctggacgtggatgaggatttgtacaacggtttcgtcagcaacgacgaccgccgcctgctc
gaatccttgcgtcgcgaaacgccggccaagctggccacggcccgcccctcgtttgccgac
gagcgcctgcaggaattgctgttccgctaccgtgcccgcaatttcccgcaaaccctgagc
gaggcggaaagcctgcgctgggaacagcaccgcgccgcccgattattcgacggcgacggc
ggcgcccgcaccatcgagatgctgtttacggaaatcgacctgctgtcggagtcggtcgat
gagcggggggaagagattctgggcgagctgtacgattacgcggagatggtggcgcccatg
cgcgactga
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