Janthinobacterium sp. HH102: JAB4_017300
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Entry
JAB4_017300 CDS
T08624
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JAB4_017300 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_017300 (xseA)
Enzymes [BR:
jah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JAB4_017300 (xseA)
DNA repair and recombination proteins [BR:
jah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JAB4_017300 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
BLH_phosphatase
Spectrin
DUF6085
ATG14
Motif
Other DBs
NCBI-ProteinID:
QOU72305
LinkDB
All DBs
Position
complement(1921519..1922877)
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AA seq
452 aa
AA seq
DB search
MNDTPTDSGFAAPPVLTVSALNQAVARLLERSFPLTWIAGEISNFTRAASGHWYFTLKDD
GAQVRAVMFRGRAQFAGFTPREGDKVEVRALVTLYGARGDYQINVEAIRRAGVGALYEAF
QRLKEKLAAQGLFDQERKRAIPMFARSIGIVTSPQAAALRDVLIALKRRAPHVGIILYPT
PVQGQQAPEKIAHAIRTASARAECDVLLVCRGGGSIEDLWSFNDEAVAHAIADCSMPVIS
GVGHETDFTIADFAADLRAATPTAAAELAATPRADWMASLRADATDLRRAMRRRLDDAAQ
TLDRHSRRLLNPKAQLQQQRLQLLALSTAMTHAARAPVKQSQYALERLRNRWAALRPDVT
APRARLVEAQRRGGAAMAQLLSQRRHRLDGLAAQLELLNPQRTLERGYAILRDEKGAIVR
SPAQLQARQNVNVRLAEGSAQIGIASVQATLE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaccccgactgacagcggctttgccgccccgcccgtgctgaccgtcagcgcc
ctgaaccaggccgtcgcgcgcctgctcgagcgctcgttccccctgacctggatcgccggc
gagatttccaacttcacgcgcgccgcttccggccactggtatttcaccttgaaggacgat
ggcgcccaggtgcgcgccgtgatgttccgcggccgcgcccagtttgccggcttcacgccg
cgcgaaggcgacaaggtggaagtgcgcgccctcgtcaccctgtacggcgcgcgcggcgat
taccagatcaacgtggaagccattcgccgcgccggcgtgggcgccctgtacgaagcgttc
cagcgcctgaaggaaaaactggccgcgcagggcctgttcgaccaggaacgcaagcgcgcc
atccccatgttcgcgcgcagcatcggcatcgtcaccagcccgcaggcggccgccctgcgc
gacgtgctgatcgcgctcaagcgccgcgcgccgcacgtgggcatcatcctgtatcccacg
cccgtgcagggccagcaggcgccggaaaaaatcgcgcacgcgatccgcacggcatcagcc
agggccgagtgcgacgttctgctggtgtgccgtggcggcggcagcatcgaggatttatgg
tcgttcaacgatgaagccgtggcgcatgcgatcgccgactgttccatgcccgtgatcagc
ggcgtgggccacgagacggatttcaccatcgccgacttcgcagccgacctgcgcgcggcc
acgccgacggcggcggccgaactggcggccacgccgcgcgccgactggatggcttccctg
cgcgccgacgcaacggacttgcgccgcgccatgcgccgccgcctcgacgacgcggcgcaa
accctggaccgccatagccgccgcctgctcaacccgaaggcgcagctgcagcagcagcgc
ctgcagctgctggccctgtccacggccatgacgcatgcggcgcgcgcgcccgtgaagcag
tcgcagtacgcactggaacgcctgcgcaaccgctgggccgccttgcggcccgacgtcact
gcgccgcgcgcgcgcctggtggaagcgcagcggcgcggcggcgcggccatggcgcagctg
ctcagccagcggcgccaccgcctcgacggcctggcggcgcagctggagctgttgaatccc
cagcgcaccctggaacgcggctatgccatcctgcgcgacgaaaaaggcgccatcgtgcgc
tcgccggcgcaactgcaggcgcgccagaacgtcaacgtgcgcctggccgaaggcagcgcg
cagatcggcatcgccagcgtgcaggcaactctggaataa
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