Janthinobacterium sp. HH102: JAB4_023070
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Entry
JAB4_023070 CDS
T08624
Symbol
rep_2
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah03420
Nucleotide excision repair
jah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JAB4_023070 (rep_2)
03430 Mismatch repair
JAB4_023070 (rep_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_023070 (rep_2)
Enzymes [BR:
jah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JAB4_023070 (rep_2)
DNA repair and recombination proteins [BR:
jah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JAB4_023070 (rep_2)
MMR (mismatch excision repair)
Other MMR factors
JAB4_023070 (rep_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QOU72859
UniProt:
A0A853SS22
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All DBs
Position
2570805..2572751
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AA seq
648 aa
AA seq
DB search
MSTDNAPQFIPKRITPTPEQVAIQTAQKKVVLIDANAGAAKTTTLALRLAEALHRGRAPE
RMLALVFTEAARVALRQRLLEVGVPLGVVKRLTIDTFDAFAAKVLLQLENMQVASMRSDE
ELRPVAWEALEVVSEKYAHRYPLEINTTNGAIAEFLKLQLRTKARLDFQNPDFESNSLDD
NLEMLGMSRTHYLWLREYEGLRGADTGDIQFRAPFDATYDLVRMLDGDEPLRQQLPAFQI
IVADELHDLNEASFRLLTMLIRRGNAFFCGAGDKDQVIYTWSGADHRFLRQRFEQEFPAL
QRLPLTASYRYGPQLAQAVGVLKNKPSVSALSRATHIELLEYDHAQPQACSAQLIAALEH
AHAGTTAILLRDRDQAIRVETALFQSGIAYGLVDMNSYLLSLEVLMLRGMVAIARKDLHA
IKSGPRRGEILEALVAFAEIPFTRAELQQAKADVANYPDLLEGFLTNQLAKSQNQDKAAL
TLAAVDYLRALPPDALAGDALQHIFGLMQLEQTARRIYVDPAQARVVARSLHGFIAVCRE
AGVALGGFAGWLGEMEDAVTVSTGKAKLVIACIDQIKGLEYNHVILPYLAVDEFPRSKTD
PLEEENRFYVAATRARDRLSLLTPEDPAYRSRYIAALQLKNKTVASKA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacagataacgccccgcagttcattcccaaacgcatcacgcccacgccggagcag
gtcgccatccagacggcgcaaaagaaagtggtcttgatcgacgccaatgccggcgcggcc
aagacgacgaccctggccctgcgcctggccgaggccctgcaccggggccgcgcgcccgaa
cgcatgctggccctcgtcttcacggaagcggcgcgcgtggccctgcgccagcgcctgctg
gaagtgggcgtgccgctgggcgtcgtcaagcgcctgacgatcgacaccttcgacgccttt
gccgccaaggtgctgttgcagctggaaaacatgcaggtggcctccatgcgcagcgatgaa
gagctgcgccccgtggcctgggaagcgctggaagtggtctccgagaaatacgctcaccgc
tatccgctggaaatcaacacgacgaatggcgccatcgccgaattcctgaaactgcaattg
cgcaccaaggcgcgcctggatttccagaatcccgacttcgagagcaattccctggacgac
aacctggaaatgctgggcatgtcgcgcacgcattatctgtggctgcgcgaatatgaaggc
ttgcgcggcgccgacacgggcgatatccagttccgcgcgcccttcgacgccacctacgac
ctcgtgcgcatgctcgacggcgacgaaccgttgcgccagcaattgcccgcgttccagatc
atcgtggccgatgaattgcacgacctgaacgaggcgtcgttccgcctgctgaccatgctg
atacgccgcggcaacgcctttttctgcggcgccggcgacaaggatcaagtgatctacacg
tggtcgggcgctgaccaccgcttcctgcgccagcgcttcgagcaggaatttcccgccttg
cagcgcctgccgctgacggcgtcctaccgctacggcccgcaactggcgcaggccgtgggc
gtgctgaaaaacaagcccagcgtgtcggccctgtcgcgcgccacccacattgaactgctc
gagtatgaccatgcgcagccgcaagcgtgcagcgcccagctgatcgccgcgctcgaacac
gcacatgcgggcacgacagccatcttgctgcgcgaccgcgaccaggcgatccgcgtggaa
acggccctgttccagagcggcatcgcgtatggcctggtggacatgaacagttatctgctg
agcctggaagtgctgatgctgcgcggcatggtcgccatcgcccgcaaggatttgcacgcg
atcaagagcggcccgcgccgcggcgaaatcctcgaagccctggtggccttcgcggaaatc
ccttttacacgcgcggaattgcagcaagccaaggccgacgtggccaattaccctgacttg
ctggaaggcttcttgacgaaccagctggccaagtcgcagaaccaggacaaggcggcgctg
accctggccgccgtcgactacctgcgcgcgctgccccccgacgccctggccggcgacgcg
ctgcagcacatctttggcctgatgcagctggaacagacggcgcgccgcatctatgtcgac
cctgcccaggcgcgggtcgtcgcccgttccctgcatggctttatcgccgtgtgccgcgaa
gcgggcgtggcgctgggcggcttcgccggctggctgggcgagatggaagacgccgtgacg
gtctcgactggcaaggccaagctggtcatcgcctgcatcgaccagatcaagggcctcgaa
tacaaccacgtgatcctgccttacctggccgtcgacgaattcccgcgcagcaagactgat
ccgctggaagaagagaaccgtttttatgtggccgccacgcgcgcacgcgacaggctcagc
ttgctgacgccggaagaccccgcctaccggagccgctacatcgccgccctgcagctgaaa
aacaagactgttgcgtccaaggcataa
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