Janthinobacterium sp. HH102: JAB4_025250
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Entry
JAB4_025250 CDS
T08624
Symbol
lcfB
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah00061
Fatty acid biosynthesis
jah00071
Fatty acid degradation
jah01100
Metabolic pathways
jah01212
Fatty acid metabolism
jah02024
Quorum sensing
jah04146
Peroxisome
Module
jah_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JAB4_025250 (lcfB)
00071 Fatty acid degradation
JAB4_025250 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JAB4_025250 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
JAB4_025250 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
jah01004
]
JAB4_025250 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jah04147
]
JAB4_025250 (lcfB)
Enzymes [BR:
jah01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JAB4_025250 (lcfB)
Lipid biosynthesis proteins [BR:
jah01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JAB4_025250 (lcfB)
Exosome [BR:
jah04147
]
Exosomal proteins
Exosomal proteins of breast milk
JAB4_025250 (lcfB)
Exosomal proteins of breast cancer cells
JAB4_025250 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QOU73072
UniProt:
A0A853T0W1
LinkDB
All DBs
Position
complement(2781882..2783420)
Genome browser
AA seq
512 aa
AA seq
DB search
MDIPALLAHLPARLSAISIYWATRAPDAPALHEGGRSWTYAQLQHSVDSAAQLLRQLNVR
AGDRLMVVGENCALQVALIFAAASIDAWIVNVNARLSAREIDTIAAHSSARRLLFLAGAS
PEAAAHAARLGAASATVDGMGELLAGDLNEAAIAEDTVPGNEQVAALIYTTGTTGQSKGV
MLTHRNLLFIAAVSSTLRGLTSSDRAYGVLPISHVYGLASVALGTLYAGAALYLVPRFSV
DGLLSALKDDELTIVQGVPAMYAKLLQTLGGADTPLPTRLRFAYAGGSPLAPSLKREVEK
LLGTALHNGYGMTESAPTISQTRLETPRRDDSVGMPIPGVEVRVVDVAGQDVTPGQPGEL
WIRGPNIMAGYYREPAMTAATMRDGGWLNTGDMARQDTDGALFIVGRTKELIIRSGFNVY
PLEVETALNAHASVVQSAVVGRTLADGNEDVIAYVELDPRQPASVAELQAWLAQTLSPYK
CPSAIIVMEALPAAATGKILKGQLRQMAQNAR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggacattcccgccctgctggcccacttgccggcgcgcctgtcggccatctccatctat
tgggcgacgcgcgcgcccgacgcgcccgcgctgcatgaaggtgggcgcagctggacctac
gcccagctgcagcacagtgtggacagcgccgcgcagctgctgcgccagctgaacgtgcgc
gccggcgaccgcctgatggtggtgggcgagaactgcgcgctgcaggtggcgctgattttt
gcggccgccagcatcgacgcgtggatcgtcaacgtcaatgcgcgcctgtcggcgcgcgag
atcgacaccatcgccgcgcacagttccgcgcggcgcctgctgttcctggccggcgcctcg
ccggaagcggccgcgcatgcggcgcgtctgggcgcggccagcgccacggtcgacggcatg
ggcgagctgctggcgggcgacttgaacgaggcggccatcgcggaagacacggtgcccggc
aacgaacaggtggccgcgctgatctacacgacgggtaccaccgggcagtcgaagggcgtg
atgctcacgcaccgcaacctgctgttcatcgccgccgtctccagcaccctgcgcggcctg
accagcagcgaccgcgcctacggcgtgctgccgatttcgcacgtgtacggcctggcgtcg
gtggccctgggcaccctgtatgcgggcgccgcgctgtacctggtgccgcgcttttccgtc
gacggcctgctctcggcactgaaggacgatgaactgaccatcgtgcaaggcgtgcccgcc
atgtacgccaagctgctgcaaaccctgggcggcgccgatacgccgctgcccacgcggctg
cgctttgcgtatgcgggcggctcgccgctggcgccgtcgctcaagcgcgaggtggaaaag
ctgctgggcaccgcgctgcacaatggctacggcatgacggaaagcgcccccaccatcagc
cagacgcgcctggaaacgccgcgccgcgacgattccgtgggcatgccgatccccggcgtg
gaagtgcgcgtggtggacgtggccggccaggacgtgacgccgggccagccgggggaatta
tggatacgcgggccgaacatcatggccggctattaccgcgaaccggccatgacggcggcc
accatgcgcgacggcggctggctcaatacgggcgacatggcgcgccaggatacggacggc
gccctgttcatcgtgggccgcaccaaggaactgatcatccgctccggcttcaatgtgtat
ccgctggaagtggaaacggccctgaacgcccacgcttccgtggtgcagtcggccgtggtc
gggcgcaccctggccgatggcaacgaggacgtcatcgcctacgtggagctggacccgcgc
cagcccgccagcgtggcagaattgcaggcctggctggcgcagaccctgtcgccgtacaag
tgcccgtccgccatcatcgtcatggaagcgctgccggcagcggccacgggcaagatttta
aaggggcagctgcggcaaatggcgcagaatgcacgataa
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